CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
naif1.S
(
Xenopus laevis
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
XB-GENE-986896
T251193_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
naif1.S
M02282_2.00
Xenopus laevis
NNDRCGTAN
NTACGYHNN
PBM
Weirauch et al.(2014)
pTH9299
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
naif1
M02281_2.00
Xenopus tropicalis
NNNCGYANN
NNTRCGNNN
PBM
Weirauch et al.(2014)
pTH8560
0.970
0.816
NAIF1_CHICK
M01260_2.00
Gallus gallus
NNNDRCGTAN
NTACGYHNNN
PBM
Lambert et al.(2019)
pTH9808
0.860
0.434
For this family, TFs with SR scores >
0.812
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02282_2.00
MADF
23
103
EMEKQKHILINHFNAGVPLVTKSNAWHDILKRVNAISTCHRELAEVKKKWSDLKTEVRRKMSQARLAVEGEGDVGTAPVML
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAI23253
MADF
23
103
EMEKQKHILINHFNAGVPLVTKSNAWHDILKRVNAISTCHRELAEVKKKWSDLKTEVRRKMSQARLAVEGEGDVGTAPVML
Links
Other
MADF
family TFs
Other
Xenopus laevis
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy