ACOC_0000053701 (Angiostrongylus costaricensis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 ACOC_0000053701 T251762_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
madf-9
M02277_2.00
Caenorhabditis elegans
VYGCGGAH

DTCCGCRB
PBM
Weirauch et al.(2014)
pTH8333
0.932 0.684
CBG08311
M02267_2.00
Caenorhabditis briggsae
RCGCGGAM

KTCCGCGY
PBM
Weirauch et al.(2014)
pTH9393
0.930 0.671
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOC_0000053701-mRNA-1 MADF 49 127

Links

Other MADF family TFs
Other Angiostrongylus costaricensis TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_19661 Ancylostoma caninum ANCCAN_19661 I 0.967
ANCDUO_21217 Ancylostoma duodenale ANCDUO_21217 I 0.971
ANCDUO_20588 Ancylostoma duodenale ANCDUO_20588 I 0.971
CBN03210 Caenorhabditis brenneri CBN03210 I 0.932
CBN17693 Caenorhabditis brenneri CBN17693 I 0.932
CBG08311 Caenorhabditis briggsae CBG08311 D 0.930
madf-9 Caenorhabditis elegans WBGene00022608 D 0.932
CJA11982 Caenorhabditis japonica CJA11982 I 0.930
CRE11120 Caenorhabditis remanei CRE11120 I 0.930
CGOC_0001115201 Cylicostephanus goldi CGOC_0001115201 I 0.947
DICVIV_09254 Dictyocaulus viviparus DICVIV_09254 I 0.971
HCOI00362100 Haemonchus contortus HCOI00362100 I 0.966
HCOI01732900 Haemonchus contortus HCOI01732900 I 0.966
HPLM_0002104601 Haemonchus placei HPLM_0002104601 I 0.961
HPBE_0002310201 Heligmosomoides bakeri HPBE_0002310201 I 0.971
NBR_0000280301 Nippostrongylus brasiliensis NBR_0000280301 I 0.904
OESDEN_02601 Oesophagostomum dentatum OESDEN_02601 I 0.970
OESDEN_17440 Oesophagostomum dentatum OESDEN_17440 I 0.970
scaffold190-EXSNAP2012.38 Pristionchus exspectatus scaffold190-EXSNAP2012.38 I 0.843
TELCIR_18230 Teladorsagia circumcincta TELCIR_18230 I 0.966