GPLIN_001081400 (Globodera pallida)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 GPLIN_001081400 T251978_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_001081400 MADF 536 617
GPLIN_001081400 MADF 652 736

Links

Other MADF family TFs
Other Globodera pallida TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-nMf.1.1.scaf00985-augustus-gene-0.14 Meloidogyne floridensis maker-nMf.1.1.scaf00985-augustus-gene-0.14 N 0.950
ASU_05114 Ascaris suum ASU_05114 N 0.941
ALUE_0000346601 Ascaris lumbricoides ALUE_0000346601 N 0.941
WUBG_08209 Wuchereria bancrofti WUBG_08209 N 0.940
EEL_0000409901 Elaeophora elaphi EEL_0000409901 N 0.940
nAv.1.0.1.g09008 Acanthocheilonema viteae nAv.1.0.1.g09008 N 0.940
nLs.2.1.2.g00834 Litomosoides sigmodontis nLs.2.1.2.g00834 N 0.940
Bm4662 Brugia malayi Bm4662 N 0.940
nDi.2.2.2.g08480 Dirofilaria immitis nDi.2.2.2.g08480 N 0.940
BTMF_0001501001 Brugia timori BTMF_0001501001 N 0.939
nOo.2.0.1.g01489 Onchocerca ochengi nOo.2.0.1.g01489 N 0.939
WBGene00248256 Onchocerca volvulus WBGene00248256 N 0.939
TCLT_0000789301 Thelazia callipaeda TCLT_0000789301 N 0.938
EVEC_0000129701 Enterobius vermicularis EVEC_0000129701 N 0.937
LOAG_01771 Loa loa LOAG_01771 N 0.937
SMUV_0001029601 Syphacia muris SMUV_0001029601 N 0.934
L898_g2485 Steinernema monticolum L898_g2485 N 0.928
DME_0000085501 Dracunculus medinensis DME_0000085501 N 0.923
L596_g13814 Steinernema carpocapsae L596_g13814 N 0.913
L893_g25983 Steinernema glaseri L893_g25983 N 0.910
L892_g8213 Steinernema scapterisci L892_g8213 N 0.904
maker-nMf.1.1.scaf10894-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf10894-snap-gene-0.4 N 0.891
DICVIV_05986 Dictyocaulus viviparus DICVIV_05986 N 0.889
NBR_0001082401 Nippostrongylus brasiliensis NBR_0001082401 N 0.889
ACOC_0000207501 Angiostrongylus costaricensis ACOC_0000207501 N 0.889
ANCCAN_12036 Ancylostoma caninum ANCCAN_12036 N 0.885
ANCCEY_05568 Ancylostoma ceylanicum ANCCEY_05568 N 0.885
HPBE_0001937401 Heligmosomoides bakeri HPBE_0001937401 N 0.885
HCOI00547400 Haemonchus contortus HCOI00547400 N 0.884
HPLM_0000813601 Haemonchus placei HPLM_0000813601 N 0.884
NECAME_10287 Necator americanus NECAME_10287 N 0.869
CBN12315 Caenorhabditis brenneri CBN12315 N 0.843
CBN13279 Caenorhabditis brenneri CBN13279 N 0.843
ASIM_0001065301 Anisakis simplex ASIM_0001065301 N 0.832
CJA06746 Caenorhabditis japonica CJA06746 N 0.824
CBG03666 Caenorhabditis briggsae CBG03666 N 0.817
OFLC_0000444401 Onchocerca flexuosa OFLC_0000444401 N 0.815