AC212823.4_FG003 (Zea mays)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AC212823.4_FG003 T252752_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL16
M06987_2.00 		Arabidopsis thaliana
TWCCHAAWDDGGWAA
TTWCCHHWTTDGGWA		 Dap-seq
OMalley et al.(2016)
AGL16_col_a 		0.750 0.750
AGL16
M06988_2.00 		Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS
STTTCCHWWTWDGGWAANWHW		 Dap-seq
OMalley et al.(2016)
AGL16_colamp_a 		0.750 0.750
Q9FVN1_MAIZE
M10982_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_03 		0.729 0.729
O82699_MALDO
M11022_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS11_01 		0.708 0.708
Solyc05g012020.2
M10986_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_01 		0.708 0.708
Solyc05g012020.2
M10987_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_Q2_01 		0.708 0.708
Solyc05g012020.2
M10988_2.00 		Solanum lycopersicum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$RIN_Q2 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AC212823.4_FGP003 MADS box 213 260

Links

Other MADS box family TFs
Other Zea mays TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Aa00445 Panicum virgatum Pavir.Aa00445 I 0.854
Pavir.Ab02921 Panicum virgatum Pavir.Ab02921 I 0.833
Sb04g028960 Sorghum bicolor Sb04g028960 I 0.833
Si019880m.g Setaria italica Si019880m.g I 0.833
Solyc02g091550.1 Solanum lycopersicum Solyc02g091550.1 I 0.812
ORGLA02G0267800 Oryza glaberrima ORGLA02G0267800 I 0.792
OPUNC02G29000 Oryza punctata OPUNC02G29000 I 0.792
GRMZM2G044408 Zea mays GRMZM2G044408 I 0.792
ORUFI02G32980 Oryza rufipogon ORUFI02G32980 I 0.792
gene25618-v1.0-hybrid Fragaria vesca gene25618-v1.0-hybrid I 0.792
ONIVA02G34790 Oryza nivara ONIVA02G34790 I 0.792
LPERR02G25570 Leersia perrieri LPERR02G25570 I 0.792
OGLUM02G31980 Oryza glumaepatula OGLUM02G31980 I 0.792
OBART02G31280 Oryza barthii OBART02G31280 I 0.792
Bra011509 Brassica rapa Bra011509 I 0.792
OLONG_004860 Oryza longistaminata OLONG_004860 I 0.792
OB02G38310 Oryza brachyantha OB02G38310 I 0.792
OMERI02G30060 Oryza meridionalis OMERI02G30060 I 0.792
Pm021962 Prunus mume Pm021962 I 0.792
Solyc01g106170.2 Solanum lycopersicum Solyc01g106170.2 I 0.792
chr6.CM0055.180.nc Lotus japonicus chr6.CM0055.180.nc I 0.792
TCM_007324 Theobroma cacao TCM_007324 I 0.792
AMTR_s00046p00208680 Amborella trichopoda AMTR_s00046p00208680 I 0.792
PRUPE_ppa024736mg Prunus persica PRUPE_ppa024736mg I 0.792
VIT_00s0211g00180 Vitis vinifera VIT_00s0211g00180 I 0.792
MADS57 Oryza sativa OS02G0731200 I 0.792
Solyc04g076680.2 Solanum lycopersicum Solyc04g076680.2 I 0.771
mgf021543m Mimulus guttatus mgf021543m I 0.771
Solyc12g088080.1 Solanum lycopersicum Solyc12g088080.1 I 0.771
GSMUA_Achr3G07310_001 Musa acuminata GSMUA_Achr3G07310_001 I 0.771
Cla023427 Citrullus lanatus Cla023427 I 0.771
29804.m001536 Ricinus communis 29804.m001536 I 0.771
mgf019667m Mimulus guttatus mgf019667m I 0.771
cassava39185.m1 Manihot esculenta cassava39185.m1 I 0.771
VIT_03s0097g00160 Vitis vinifera VIT_03s0097g00160 I 0.771
gene26429-v1.0-hybrid Fragaria vesca gene26429-v1.0-hybrid I 0.771
VIT_00s0211g00150 Vitis vinifera VIT_00s0211g00150 I 0.771
PGSC0003DMG400009349 Solanum tuberosum PGSC0003DMG400009349 I 0.771
Ca_14956 Cicer arietinum Ca_14956 I 0.771
MTR_2g009890 Medicago truncatula MTR_2g009890 I 0.771
SapurV1A.0019s1110 Salix purpurea SapurV1A.0019s1110 I 0.771
Bra017638 Brassica rapa Bra017638 I 0.771
Lus10042918.g Linum usitatissimum Lus10042918.g I 0.771
AGL16 Arabidopsis lyrata fgenesh2_kg.5__2158__AT3G57230.1 I 0.771
Bo7g116760 Brassica oleracea Bo7g116760 I 0.771
Thhalv10026116m.g Eutrema salsugineum Thhalv10026116m.g I 0.771
LjSGA_021013.1 Lotus japonicus LjSGA_021013.1 I 0.771
BGIOSGA008983 Oryza indica BGIOSGA008983 I 0.771
Bo1g007520 Brassica oleracea Bo1g007520 I 0.771
Lus10028214.g Linum usitatissimum Lus10028214.g I 0.771
MDP0000475549 Malus domestica MDP0000475549 I 0.771
Gorai.008G018100 Gossypium raimondii Gorai.008G018100 I 0.771
PK27820.1 Cannabis sativa PK27820.1 I 0.750
cassava33801.m1 Manihot esculenta cassava33801.m1 I 0.750
Eucgr.I02600 Eucalyptus grandis Eucgr.I02600 I 0.750
evm.TU.supercontig_177.14 Carica papaya evm.TU.supercontig_177.14 I 0.750
Cla014307 Citrullus lanatus Cla014307 I 0.750
Bo7g025330 Brassica oleracea Bo7g025330 I 0.750
AGL16 Arabidopsis thaliana AT3G57230 D 0.750
Cucsa.103820 Cucumis sativus Cucsa.103820 I 0.750
OPUNC04G12890 Oryza punctata OPUNC04G12890 I 0.750
Carubv10017951m.g Capsella rubella Carubv10017951m.g I 0.750
Pm004349 Prunus mume Pm004349 I 0.750
SapurV1A.1370s0060 Salix purpurea SapurV1A.1370s0060 I 0.750
Carubv10015972m.g Capsella rubella Carubv10015972m.g I 0.750
29596.m000699 Ricinus communis 29596.m000699 I 0.750
Gorai.009G227500 Gossypium raimondii Gorai.009G227500 I 0.750
Pavir.Aa01540 Panicum virgatum Pavir.Aa01540 I 0.750
SapurV1A.2345s0030 Salix purpurea SapurV1A.2345s0030 I 0.750
Gorai.010G032700 Gossypium raimondii Gorai.010G032700 I 0.750
Cagra.0578s0054 Capsella grandiflora Cagra.0578s0054 I 0.750
MTR_5g066960 Medicago truncatula MTR_5g066960 I 0.750
Bostr.20505s0022 Boechera stricta Bostr.20505s0022 I 0.750
GRMZM2G055782 Zea mays GRMZM2G055782 I 0.750
LPERR04G11770 Leersia perrieri LPERR04G11770 I 0.750
Cagra.3821s0004 Capsella grandiflora Cagra.3821s0004 I 0.750
GLYMA02G38091 Glycine max GLYMA02G38091 I 0.750
Bostr.13083s0004 Boechera stricta Bostr.13083s0004 I 0.750
TCM_034549 Theobroma cacao TCM_034549 I 0.750
mgf007519m Mimulus guttatus mgf007519m I 0.750
mgb000125m Mimulus guttatus mgb000125m I 0.750
ANR1 Arabidopsis thaliana AT2G14210 I 0.750
GSMUA_Achr3G20280_001 Musa acuminata GSMUA_Achr3G20280_001 I 0.750
TCM_000931 Theobroma cacao TCM_000931 I 0.750
Aquca_010_00060 Aquilegia coerulea Aquca_010_00060 I 0.750
AMTR_s00109p00015260 Amborella trichopoda AMTR_s00109p00015260 I 0.750
Cucsa.331900 Cucumis sativus Cucsa.331900 I 0.750
PK27158.1 Cannabis sativa PK27158.1 I 0.743
Traes_6DL_D1C1DBD34 Triticum aestivum Traes_6DL_D1C1DBD34 I 0.729
Traes_6AL_B5D4C3A49 Triticum aestivum Traes_6AL_B5D4C3A49 I 0.729
TRIUR3_08704 Triticum urartu TRIUR3_08704 I 0.729
TRIUR3_19891 Triticum urartu TRIUR3_19891 I 0.729
Thhalv10026139m.g Eutrema salsugineum Thhalv10026139m.g I 0.729
orange1.1g037016m.g Citrus sinensis orange1.1g037016m.g I 0.729
Lus10029556.g Linum usitatissimum Lus10029556.g I 0.729
cassava4651.m1 Manihot esculenta cassava4651.m1 I 0.729
cassava44571.m1 Manihot esculenta cassava44571.m1 I 0.729
Carubv10006453m.g Capsella rubella Carubv10006453m.g I 0.729
Gorai.013G054000 Gossypium raimondii Gorai.013G054000 I 0.729
Traes_2DL_662837152 Triticum aestivum Traes_2DL_662837152 I 0.729
Gorai.013G053800 Gossypium raimondii Gorai.013G053800 I 0.729
MDP0000228942 Malus domestica MDP0000228942 I 0.729
MDP0000234911 Malus domestica MDP0000234911 I 0.729
cassava19528.m1 Manihot esculenta cassava19528.m1 I 0.729
Pm002271 Prunus mume Pm002271 I 0.729
Thhalv10022995m.g Eutrema salsugineum Thhalv10022995m.g I 0.729
Cagra.5414s0059 Capsella grandiflora Cagra.5414s0059 I 0.729
MDP0000783966 Malus domestica MDP0000783966 I 0.729
Gorai.007G058200 Gossypium raimondii Gorai.007G058200 I 0.729
cassava26340.m1 Manihot esculenta cassava26340.m1 I 0.729
ANR1 Vitis vinifera VIT_18s0001g07900 I 0.729
Si019337m.g Setaria italica Si019337m.g I 0.729
GSMUA_Achr9G15540_001 Musa acuminata GSMUA_Achr9G15540_001 I 0.729
LPERR02G17700 Leersia perrieri LPERR02G17700 I 0.729
GSMUA_Achr1G03630_001 Musa acuminata GSMUA_Achr1G03630_001 I 0.729
Traes_2BL_3E613DE21 Triticum aestivum Traes_2BL_3E613DE21 I 0.729
Bra019343 Brassica rapa Bra019343 I 0.729
OB02G29310 Oryza brachyantha OB02G29310 I 0.729
OB04G22330 Oryza brachyantha OB04G22330 I 0.729
OGLUM02G22050 Oryza glumaepatula OGLUM02G22050 I 0.729
OGLUM04G14880 Oryza glumaepatula OGLUM04G14880 I 0.729
BRADI5G12440 Brachypodium distachyon BRADI5G12440 I 0.729
OBART04G15020 Oryza barthii OBART04G15020 I 0.729
OBART02G21870 Oryza barthii OBART02G21870 I 0.729
Bra020826 Brassica rapa Bra020826 I 0.729
GRMZM2G316366 Zea mays GRMZM2G316366 I 0.729
AGL21 Arabidopsis lyrata fgenesh2_kg.7__253__AT4G37940.1 I 0.729
GLYMA01G02525 Glycine max GLYMA01G02525 I 0.729
F775_27066 Aegilops tauschii F775_27066 I 0.729
F775_13452 Aegilops tauschii F775_13452 I 0.729
BRADI3G57017 Brachypodium distachyon BRADI3G57017 I 0.729
BRADI3G46920 Brachypodium distachyon BRADI3G46920 I 0.729
GLYMA08G07001 Glycine max GLYMA08G07001 I 0.729
GLYMA15G06470 Glycine max GLYMA15G06470 I 0.729
GLYMA14G36221 Glycine max GLYMA14G36221 I 0.729
GLYMA13G32810 Glycine max GLYMA13G32810 I 0.729
GLYMA09G33451 Glycine max GLYMA09G33451 I 0.729
OLONG_016283 Oryza longistaminata OLONG_016283 I 0.729
Bra011797 Brassica rapa Bra011797 I 0.729
Bo3g165710 Brassica oleracea Bo3g165710 I 0.729
Bo3g153080 Brassica oleracea Bo3g153080 I 0.729
Bo7g108370 Brassica oleracea Bo7g108370 I 0.729
OLONG_024179 Oryza longistaminata OLONG_024179 I 0.729
MADS27 Oryza sativa OS02G0579600 I 0.729
POPTR_0005s19440 Populus trichocarpa POPTR_0005s19440 I 0.729
Q9FVN1_MAIZE Zea mays Q9FVN1_MAIZE D 0.729
AGL21 Arabidopsis thaliana AT4G37940 I 0.729
Traes_2AL_267502097 Triticum aestivum Traes_2AL_267502097 I 0.729
BGIOSGA008494 Oryza indica BGIOSGA008494 I 0.729
Bo1g003270 Brassica oleracea Bo1g003270 I 0.729
Sb04g024010 Sorghum bicolor Sb04g024010 I 0.729
ORUFI04G16410 Oryza rufipogon ORUFI04G16410 I 0.729
OS04G0461300 Oryza sativa OS04G0461300 I 0.729
ORUFI02G22950 Oryza rufipogon ORUFI02G22950 I 0.729
ONIVA04G13150 Oryza nivara ONIVA04G13150 I 0.729
OPUNC02G19600 Oryza punctata OPUNC02G19600 I 0.729
ONIVA02G24100 Oryza nivara ONIVA02G24100 I 0.729
OMERI02G21410 Oryza meridionalis OMERI02G21410 I 0.729
Bra010623 Brassica rapa Bra010623 I 0.729
ORGLA04G0120000 Oryza glaberrima ORGLA04G0120000 I 0.729
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.724
chr4.CM0126.630.nc Lotus japonicus chr4.CM0126.630.nc I 0.708
SapurV1A.0228s0130 Salix purpurea SapurV1A.0228s0130 I 0.708
Bo1g031900 Brassica oleracea Bo1g031900 I 0.708
Bra039921 Brassica rapa Bra039921 I 0.708
SapurV1A.0004s0740 Salix purpurea SapurV1A.0004s0740 I 0.708
Pavir.Ga01454 Panicum virgatum Pavir.Ga01454 I 0.708
Pavir.Fb01587 Panicum virgatum Pavir.Fb01587 I 0.708
Bra013662 Brassica rapa Bra013662 I 0.708
Thhalv10000598m.g Eutrema salsugineum Thhalv10000598m.g I 0.708
Pavir.Gb01527 Panicum virgatum Pavir.Gb01527 I 0.708
Bra030222 Brassica rapa Bra030222 I 0.708
Bo8g100930 Brassica oleracea Bo8g100930 I 0.708
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I 0.708
O82699_MALDO Malus domestica O82699_MALDO D 0.708
GSMUA_Achr10G30040_001 Musa acuminata GSMUA_Achr10G30040_001 I 0.708
MADS23 Oryza sativa OS08G0431900 I 0.708
PGSC0003DMG400000008 Solanum tuberosum PGSC0003DMG400000008 I 0.708
ORGLA08G0137000 Oryza glaberrima ORGLA08G0137000 I 0.708
cassava3099.m1 Manihot esculenta cassava3099.m1 I 0.708
Cucsa.257910 Cucumis sativus Cucsa.257910 I 0.708
Ca_19854 Cicer arietinum Ca_19854 I 0.708
PGSC0003DMG400010263 Solanum tuberosum PGSC0003DMG400010263 I 0.708
AMTR_s00001p00267050 Amborella trichopoda AMTR_s00001p00267050 I 0.708
Solyc05g012020.2 Solanum lycopersicum Solyc05g012020.2 D 0.708
Si012517m.g Setaria italica Si012517m.g I 0.708
Sb06g019040 Sorghum bicolor Sb06g019040 I 0.708
AGL18 Vitis vinifera VIT_08s0007g08790 I 0.708
OBART08G15610 Oryza barthii OBART08G15610 I 0.708
Aquca_013_00477 Aquilegia coerulea Aquca_013_00477 I 0.708
GRMZM2G032905 Zea mays GRMZM2G032905 I 0.708
Eucgr.I02598 Eucalyptus grandis Eucgr.I02598 I 0.708
gene22696-v1.0-hybrid Fragaria vesca gene22696-v1.0-hybrid I 0.708
GLYMA03G02191 Glycine max GLYMA03G02191 I 0.708
GLYMA02G33040 Glycine max GLYMA02G33040 I 0.708
Eucgr.F02161 Eucalyptus grandis Eucgr.F02161 I 0.708
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I 0.708
OB01G48510 Oryza brachyantha OB01G48510 I 0.708
Bostr.25542s0226 Boechera stricta Bostr.25542s0226 I 0.708
MTR_5g031000 Medicago truncatula MTR_5g031000 I 0.708
GSMUA_Achr5G10250_001 Musa acuminata GSMUA_Achr5G10250_001 I 0.708
MDP0000149676 Malus domestica MDP0000149676 I 0.708