AC233912.1_FG001 (Zea mays)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AC233912.1_FG001 T252753_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
M17_MAIZE
M10959_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M17_01 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AC233912.1_FGP001 MADS box 10 57

Links

Other MADS box family TFs
Other Zea mays TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G128953 Zea mays GRMZM2G128953 I 1.000
GRMZM2G135018 Zea mays GRMZM2G135018 I 0.979
Sb06g028420 Sorghum bicolor Sb06g028420 I 0.979
GRMZM2G005155 Zea mays GRMZM2G005155 I 0.979
Pavir.Ga00461 Panicum virgatum Pavir.Ga00461 I 0.979
GRMZM2G446426 Zea mays GRMZM2G446426 N 0.958
Pavir.Gb00526 Panicum virgatum Pavir.Gb00526 I 0.958
GRMZM2G137387 Zea mays GRMZM2G137387 I 0.958
GRMZM2G148220 Zea mays GRMZM2G148220 N 0.938
LPERR04G20730 Leersia perrieri LPERR04G20730 I 0.917
OGLUM04G25090 Oryza glumaepatula OGLUM04G25090 I 0.896
ORUFI04G26810 Oryza rufipogon ORUFI04G26810 I 0.896
MADS31 Oryza sativa OS04G0614100 I 0.896
ORGLA04G0222300 Oryza glaberrima ORGLA04G0222300 I 0.896
OPUNC04G22650 Oryza punctata OPUNC04G22650 I 0.896
OBART04G25610 Oryza barthii OBART04G25610 I 0.896
OB04G32080 Oryza brachyantha OB04G32080 I 0.896
OMERI04G20840 Oryza meridionalis OMERI04G20840 I 0.896
BGIOSGA017110 Oryza indica BGIOSGA017110 I 0.896
BRADI5G21700 Brachypodium distachyon BRADI5G21700 I 0.875
OLONG_021245 Oryza longistaminata OLONG_021245 I 0.875
TRIUR3_18402 Triticum urartu TRIUR3_18402 I 0.854
MLOC_12133 Hordeum vulgare MLOC_12133 I 0.854
Traes_2DL_6CD5A5CD9 Triticum aestivum Traes_2DL_6CD5A5CD9 I 0.854
Traes_2AL_8DF89AA72 Triticum aestivum Traes_2AL_8DF89AA72 I 0.854
F775_05654 Aegilops tauschii F775_05654 I 0.854
GSMUA_Achr2G02660_001 Musa acuminata GSMUA_Achr2G02660_001 I 0.833
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.792
BRADI3G05260 Brachypodium distachyon BRADI3G05260 I 0.750
Traes_6DS_9BBDCC9F7 Triticum aestivum Traes_6DS_9BBDCC9F7 I 0.750
Traes_6AS_57E50EE92 Triticum aestivum Traes_6AS_57E50EE92 I 0.750
Traes_6BS_5789476CB Triticum aestivum Traes_6BS_5789476CB I 0.750
TRIUR3_26896 Triticum urartu TRIUR3_26896 I 0.750
Pavir.Da00991 Panicum virgatum Pavir.Da00991 I 0.750
F775_30836 Aegilops tauschii F775_30836 I 0.750
MLOC_65966 Hordeum vulgare MLOC_65966 I 0.750
MADS29 Oryza sativa OS02G0170300 I 0.729
OS06G0347700 Oryza sativa OS06G0347700 I 0.729
BGIOSGA007056 Oryza indica BGIOSGA007056 I 0.729
ORGLA02G0049700 Oryza glaberrima ORGLA02G0049700 I 0.729
ORUFI02G05500 Oryza rufipogon ORUFI02G05500 I 0.729
Sb04g004736 Sorghum bicolor Sb04g004736 I 0.729
ORUFI06G14980 Oryza rufipogon ORUFI06G14980 I 0.729
AMTR_s00002p00262770 Amborella trichopoda AMTR_s00002p00262770 I 0.729
Carubv10026982m.g Capsella rubella Carubv10026982m.g I 0.729
OPUNC06G13170 Oryza punctata OPUNC06G13170 I 0.729
Pavir.Aa03173 Panicum virgatum Pavir.Aa03173 I 0.729
Pavir.Ab00475 Panicum virgatum Pavir.Ab00475 I 0.729
TT16 Vitis vinifera VIT_01s0011g01560 I 0.729
Si018183m.g Setaria italica Si018183m.g I 0.729
ORGLA06G0125600 Oryza glaberrima ORGLA06G0125600 I 0.729
BGIOSGA022872 Oryza indica BGIOSGA022872 I 0.729
OGLUM02G05240 Oryza glumaepatula OGLUM02G05240 I 0.729
OGLUM06G15040 Oryza glumaepatula OGLUM06G15040 I 0.729
OLONG_018231 Oryza longistaminata OLONG_018231 I 0.729
OBART02G05380 Oryza barthii OBART02G05380 I 0.729
OB02G14670 Oryza brachyantha OB02G14670 I 0.729
F775_15097 Aegilops tauschii F775_15097 I 0.729
LPERR02G04610 Leersia perrieri LPERR02G04610 I 0.729
M17_MAIZE Zea mays M17_MAIZE D 0.729
OMERI02G06250 Oryza meridionalis OMERI02G06250 I 0.729
OBART06G14060 Oryza barthii OBART06G14060 I 0.729
ONIVA06G16870 Oryza nivara ONIVA06G16870 I 0.729
OPUNC02G04560 Oryza punctata OPUNC02G04560 I 0.729
ONIVA02G05710 Oryza nivara ONIVA02G05710 I 0.729
OMERI06G15180 Oryza meridionalis OMERI06G15180 I 0.729
OLONG_023633 Oryza longistaminata OLONG_023633 I 0.711
Carubv10027093m.g Capsella rubella Carubv10027093m.g I 0.708
Thhalv10015303m.g Eutrema salsugineum Thhalv10015303m.g I 0.708
Cagra.0277s0030 Capsella grandiflora Cagra.0277s0030 I 0.708
Bostr.26833s0022 Boechera stricta Bostr.26833s0022 I 0.708
GRMZM2G130382 Zea mays GRMZM2G130382 I 0.708
GRMZM2G055782 Zea mays GRMZM2G055782 I 0.708
AGL16 Arabidopsis lyrata fgenesh2_kg.5__2158__AT3G57230.1 I 0.708
OPUNC04G12890 Oryza punctata OPUNC04G12890 I 0.708
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.708
Pavir.J09556 Panicum virgatum Pavir.J09556 I 0.708
AMTR_s00001p00270400 Amborella trichopoda AMTR_s00001p00270400 I 0.708
AGL15 Vitis vinifera VIT_13s0158g00100 I 0.708
AGL71 Arabidopsis thaliana AT5G51870 I 0.708
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.708
Solyc04g076680.2 Solanum lycopersicum Solyc04g076680.2 I 0.708
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.708
Bo1g007520 Brassica oleracea Bo1g007520 I 0.708
Traes_7BL_F5B6736D0 Triticum aestivum Traes_7BL_F5B6736D0 I 0.708
mgf025830m Mimulus guttatus mgf025830m I 0.708
PGSC0003DMG400009349 Solanum tuberosum PGSC0003DMG400009349 I 0.708
OB06G22200 Oryza brachyantha OB06G22200 I 0.708
Bra011509 Brassica rapa Bra011509 I 0.708
Aquca_022_00241 Aquilegia coerulea Aquca_022_00241 I 0.708