AGL65 (Arabidopsis thaliana)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AT1G18750 T252835_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing)family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G18750.1 MADS box 10 57
AT1G18750.3 MADS box 10 57
AT1G18750.4 MADS box 10 57

Links

Other MADS box family TFs
Other Arabidopsis thaliana TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.708
Carubv10009419m.g Capsella rubella Carubv10009419m.g I 0.938
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.729
Carubv10020210m.g Capsella rubella Carubv10020210m.g I 0.739
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I 0.896
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.792
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.812
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.812
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.812
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I 0.938
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I 0.708
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.761
mgf000945m Mimulus guttatus mgf000945m I 0.729
mgf004425m Mimulus guttatus mgf004425m I 0.729
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.771
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.729
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I 0.717
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I 1.000
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.729
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.854
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.833
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.854
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I 0.717
Thhalv10019726m.g Eutrema salsugineum Thhalv10019726m.g I 0.708
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.833
PK21701.1 Cannabis sativa PK21701.1 I 0.812
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.792
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.739
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.729
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I 0.739
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.708
MDP0000146231 Malus domestica MDP0000146231 I 0.729
MDP0000146415 Malus domestica MDP0000146415 I 0.729
MDP0000147667 Malus domestica MDP0000147667 I 0.750
MDP0000193129 Malus domestica MDP0000193129 I 0.812
MDP0000773068 Malus domestica MDP0000773068 I 0.729
MDP0000919323 Malus domestica MDP0000919323 I 0.729
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I 0.896
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.708
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.792
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.875
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.896
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I 0.708
F775_13266 Aegilops tauschii F775_13266 I 0.783
AGL65 Arabidopsis lyrata fgenesh2_kg.1__2055__AT1G18750.1 I 0.979
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.771
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.708
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.708
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.750
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.729
Bra031049 Brassica rapa Bra031049 I 0.875
Bra025685 Brassica rapa Bra025685 I 0.833
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.729
AGL30 Arabidopsis thaliana AT2G03060 I 0.783
Bo6g109050 Brassica oleracea Bo6g109050 I 0.717
Bo8g068060 Brassica oleracea Bo8g068060 I 0.875
Bo8g104060 Brassica oleracea Bo8g104060 I 0.875
Bra004393 Brassica rapa Bra004393 I 0.717
Bra016544 Brassica rapa Bra016544 I 0.875
Bra017404 Brassica rapa Bra017404 I 0.717
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.812
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.708
AGL65 Vitis vinifera VIT_17s0000g06340 I 0.854
Ca_18082 Cicer arietinum Ca_18082 I 0.708
Cla010361 Citrullus lanatus Cla010361 I 0.750
Cla018884 Citrullus lanatus Cla018884 I 0.708
Pm006479 Prunus mume Pm006479 I 0.729
Pm024895 Prunus mume Pm024895 I 0.792
29813.m001508 Ricinus communis 29813.m001508 I 0.739
30138.m004061 Ricinus communis 30138.m004061 I 0.875
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.783
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.783
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.792
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.729
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.783
Solyc03g115910.1 Solanum lycopersicum Solyc03g115910.1 I 0.729
TCM_011687 Theobroma cacao TCM_011687 I 0.717
TCM_014051 Theobroma cacao TCM_014051 I 0.875
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.783
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.783
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.750