AGL65 (Arabidopsis thaliana)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AT1G18750 T252835_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing)family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G18750.1 MADS box 10 57
AT1G18750.3 MADS box 10 57
AT1G18750.4 MADS box 10 57

Links

Other MADS box family TFs
Other Arabidopsis thaliana TFs

82 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29729.m002292 Ricinus communis 29729.m002292 I 0.000
29820.m001008 Ricinus communis 29820.m001008 I 0.000
Bo1g141310 Brassica oleracea Bo1g141310 I 0.000
Bo2g006960 Brassica oleracea Bo2g006960 I 0.000
Bo3g063910 Brassica oleracea Bo3g063910 I 0.000
Bo5g136930 Brassica oleracea Bo5g136930 I 0.000
Bo9g177130 Brassica oleracea Bo9g177130 I 0.000
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.000
Bra001386 Brassica rapa Bra001386 I 0.000
Bra005852 Brassica rapa Bra005852 I 0.000
Bra028759 Brassica rapa Bra028759 I 0.000
Bra029889 Brassica rapa Bra029889 I 0.000
Bra034159 Brassica rapa Bra034159 I 0.000
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.000
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.000
Cagra.7053s0020 Capsella grandiflora Cagra.7053s0020 I 0.000
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.000
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.000
Carubv10023556m.g Capsella rubella Carubv10023556m.g I 0.000
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.000
cassava46663.m1 Manihot esculenta cassava46663.m1 I 0.000
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.000
Cla006713 Citrullus lanatus Cla006713 I 0.000
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.000
DREB2A Arabidopsis thaliana AT5G05410 D 0.000
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.000
DREB2B Arabidopsis thaliana AT3G11020 I 0.000
DREB2B Arabidopsis lyrata fgenesh2_kg.3__1148__AT3G11020.1 I 0.000
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.000
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.000
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.000
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.000
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.000
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.000
MDP0000165880 Malus domestica MDP0000165880 I 0.000
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.000
MTR_7g070220 Medicago truncatula MTR_7g070220 I 0.000
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.000
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.000
PK07402.1 Cannabis sativa PK07402.1 D 0.000
Pm018989 Prunus mume Pm018989 I 0.000
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.000
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.000
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.000
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.000
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.000
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.000
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.000
Solyc06g050520.1 Solanum lycopersicum Solyc06g050520.1 I 0.000
TCM_021596 Theobroma cacao TCM_021596 I 0.000
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.000
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.000