CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGL102
(
Arabidopsis thaliana
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
AT1G47760
T252848_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G47760.1
MADS box
10
57
FIEDSIERKATFSRRRNGIFKKADELAKLCNVEIAVLVISPTNIPYTY
Links
Other
MADS box
family TFs
Other
Arabidopsis thaliana
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.15654s0054
Boechera stricta
Bostr.15654s0054
N
0.812
fgenesh1_pm.C_scaffold_1003002
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1003002
N
0.792
scaffold_104367.1
Arabidopsis lyrata
scaffold_104367.1
N
0.750
scaffold_104372.1
Arabidopsis lyrata
scaffold_104372.1
N
0.750