AGL23 (Arabidopsis thaliana)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AT1G65360 T252857_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes AGL23, a Type I MADS-box gene that controls female gametophyte development and the biogenesis of organelles during embryo development.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G65360.1 MADS box 15 62

Links

Other MADS box family TFs
Other Arabidopsis thaliana TFs

200 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.833
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.833
fgenesh1_pm.C_scaffold_7000337 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000337 N 0.812
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.812
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.812
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.812
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.812
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.792
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.792
TCM_006323 Theobroma cacao TCM_006323 N 0.792
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.792
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.792
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.792
Cagra.1968s0094 Capsella grandiflora Cagra.1968s0094 N 0.792
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.792
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.792
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.792
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.792
Carubv10010156m.g Capsella rubella Carubv10010156m.g N 0.792
evm.TU.supercontig_695.5 Carica papaya evm.TU.supercontig_695.5 N 0.792
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.792
Bo2g024910 Brassica oleracea Bo2g024910 N 0.792
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.792
AGL28 Arabidopsis thaliana AT1G01530 N 0.792
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.792
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.792
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.792
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.792
Cla006571 Citrullus lanatus Cla006571 N 0.792
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.792
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.792
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.792
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.792
evm.TU.supercontig_758.4 Carica papaya evm.TU.supercontig_758.4 N 0.771
evm.TU.supercontig_439.7 Carica papaya evm.TU.supercontig_439.7 N 0.771
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.771
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.771
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.771
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.771
evm.TU.supercontig_1455.2 Carica papaya evm.TU.supercontig_1455.2 N 0.771
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.771
evm.TU.supercontig_695.1 Carica papaya evm.TU.supercontig_695.1 N 0.771
Ca_04662 Cicer arietinum Ca_04662 N 0.771
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.771
evm.TU.supercontig_695.7 Carica papaya evm.TU.supercontig_695.7 N 0.771
evm.TU.supercontig_758.2 Carica papaya evm.TU.supercontig_758.2 N 0.771
evm.TU.supercontig_505.2 Carica papaya evm.TU.supercontig_505.2 N 0.771
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.771
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.771
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.771
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.771
Bra020247 Brassica rapa Bra020247 N 0.771
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.771
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.771
evm.TU.contig_33038 Carica papaya evm.TU.contig_33038 N 0.771
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.771
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.771
evm.TU.supercontig_347.2 Carica papaya evm.TU.supercontig_347.2 N 0.771
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.771
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.771
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.771
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.771
30099.m001672 Ricinus communis 30099.m001672 N 0.771
chr2.CM0904.120.nd Lotus japonicus chr2.CM0904.120.nd N 0.771
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.771
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.771
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.771
evm.TU.contig_24748.5 Carica papaya evm.TU.contig_24748.5 N 0.771
evm.TU.contig_26687.3 Carica papaya evm.TU.contig_26687.3 N 0.771
evm.TU.contig_24748.4 Carica papaya evm.TU.contig_24748.4 N 0.771
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.771
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.771
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.771
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.771
evm.TU.contig_27553.3 Carica papaya evm.TU.contig_27553.3 N 0.771
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.771
evm.TU.contig_30908.1 Carica papaya evm.TU.contig_30908.1 N 0.771
evm.TU.contig_30114.1 Carica papaya evm.TU.contig_30114.1 N 0.771
evm.TU.contig_30005.4 Carica papaya evm.TU.contig_30005.4 N 0.771
Pm021071 Prunus mume Pm021071 N 0.771
29613.m000367 Ricinus communis 29613.m000367 N 0.771
evm.TU.supercontig_348.4 Carica papaya evm.TU.supercontig_348.4 N 0.771
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.750
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.750
evm.TU.contig_37082 Carica papaya evm.TU.contig_37082 N 0.750
evm.TU.supercontig_347.10 Carica papaya evm.TU.supercontig_347.10 N 0.750
evm.TU.supercontig_347.8 Carica papaya evm.TU.supercontig_347.8 N 0.750
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.750
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.750
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.750
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.750
evm.TU.supercontig_505.5 Carica papaya evm.TU.supercontig_505.5 N 0.750
TCM_040735 Theobroma cacao TCM_040735 N 0.750
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.750
MDP0000434703 Malus domestica MDP0000434703 I 0.750
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.750
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.750
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.750
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.750
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.750
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.750
Thhalv10017754m.g Eutrema salsugineum Thhalv10017754m.g N 0.750
Bra002480 Brassica rapa Bra002480 N 0.750
AGL61 Arabidopsis thaliana AT2G24840 N 0.750
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.750
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.750
AGL62 Arabidopsis thaliana AT5G60440 I 0.750
Bo1g112460 Brassica oleracea Bo1g112460 N 0.750
Bo9g142570 Brassica oleracea Bo9g142570 N 0.750
Bo5g113750 Brassica oleracea Bo5g113750 N 0.750
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.750
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.750
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.750
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.750
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.750
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.750
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.750
Ca_04659 Cicer arietinum Ca_04659 N 0.750
Ca_04660 Cicer arietinum Ca_04660 N 0.750
Pm021070 Prunus mume Pm021070 N 0.750
evm.TU.supercontig_654.5 Carica papaya evm.TU.supercontig_654.5 N 0.750
Ca_04665 Cicer arietinum Ca_04665 N 0.750
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.750
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.750
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.750
MTR_5g045560 Medicago truncatula MTR_5g045560 N 0.750
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.750
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.750
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.750
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.737
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.729
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.729
evm.TU.supercontig_505.6 Carica papaya evm.TU.supercontig_505.6 N 0.729
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.729
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.729
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.729
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.729
MDP0000221590 Malus domestica MDP0000221590 N 0.729
MDP0000278770 Malus domestica MDP0000278770 N 0.729
MDP0000168914 Malus domestica MDP0000168914 N 0.729
MDP0000233925 Malus domestica MDP0000233925 N 0.729
mgf024307m Mimulus guttatus mgf024307m N 0.729
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.729
mgf018529m Mimulus guttatus mgf018529m N 0.729
Bra022434 Brassica rapa Bra022434 N 0.729
Bra038225 Brassica rapa Bra038225 N 0.729
MTR_1g108580 Medicago truncatula MTR_1g108580 N 0.729
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.729
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.729
Pm021018 Prunus mume Pm021018 N 0.729
Ca_04661 Cicer arietinum Ca_04661 N 0.729
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.729
evm.TU.contig_35157.2 Carica papaya evm.TU.contig_35157.2 N 0.729
evm.TU.contig_38155.1 Carica papaya evm.TU.contig_38155.1 N 0.729
MTR_2g093190 Medicago truncatula MTR_2g093190 N 0.729
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.729
Bo2g024870 Brassica oleracea Bo2g024870 N 0.729
Eucgr.I02506 Eucalyptus grandis Eucgr.I02506 N 0.729
evm.TU.supercontig_109.51 Carica papaya evm.TU.supercontig_109.51 N 0.727
MTR_3g067875 Medicago truncatula MTR_3g067875 N 0.723
MTR_1g075570 Medicago truncatula MTR_1g075570 N 0.711
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.708
MTR_0121s0100 Medicago truncatula MTR_0121s0100 N 0.708
MTR_1g105905 Medicago truncatula MTR_1g105905 N 0.708
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.708
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.708
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.708
Bra007829 Brassica rapa Bra007829 N 0.708
Bo8g099550 Brassica oleracea Bo8g099550 N 0.708
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.708
Bra011938 Brassica rapa Bra011938 N 0.708
Bra020242 Brassica rapa Bra020242 N 0.708
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.708
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.708
Bra026764 Brassica rapa Bra026764 N 0.708
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.708
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.708
cassava8711.m1 Manihot esculenta cassava8711.m1 N 0.708
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.708
30099.m001671 Ricinus communis 30099.m001671 N 0.708
mgf022790m Mimulus guttatus mgf022790m N 0.708
Cagra.1695s0023 Capsella grandiflora Cagra.1695s0023 N 0.708
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.708
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.708
Carubv10007644m.g Capsella rubella Carubv10007644m.g N 0.708
Ca_07607 Cicer arietinum Ca_07607 N 0.708
Ca_26354 Cicer arietinum Ca_26354 N 0.708
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.708
MTR_5g053390 Medicago truncatula MTR_5g053390 N 0.708
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.708
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.708
evm.TU.supercontig_851.1 Carica papaya evm.TU.supercontig_851.1 N 0.708
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.708
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.708
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.708
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.708
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.705
evm.TU.contig_47064.2 Carica papaya evm.TU.contig_47064.2 N 0.702
evm.TU.contig_27553.5 Carica papaya evm.TU.contig_27553.5 N 0.702
Bo4g070340 Brassica oleracea Bo4g070340 N 0.702