AGL30 (Arabidopsis thaliana)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AT2G03060 T252865_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
0.783 0.783
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G03060.1 MADS box 10 55
AT2G03060.2 MADS box 10 55
AT2G03060.3 MADS box 10 55
AT2G03060.7 MADS box 10 55

Links

Other MADS box family TFs
Other Arabidopsis thaliana TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_13266 Aegilops tauschii F775_13266 I 0.717
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.804
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.761
AGL65 Arabidopsis lyrata fgenesh2_kg.1__2055__AT1G18750.1 I 0.761
AGL94 Arabidopsis lyrata Al_scaffold_0002_1615 N 0.761
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.978
AGL65 Arabidopsis thaliana AT1G18750 D 0.783
AGL94 Arabidopsis thaliana AT1G69540 N 0.739
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.978
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I 0.804
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I 0.783
Bo8g104060 Brassica oleracea Bo8g104060 I 0.761
Bo9g072860 Brassica oleracea Bo9g072860 N 0.870
Bo7g080890 Brassica oleracea Bo7g080890 I 0.848
Bo6g109050 Brassica oleracea Bo6g109050 I 0.717
Bo8g068060 Brassica oleracea Bo8g068060 I 0.761
Bra031049 Brassica rapa Bra031049 I 0.761
Bra025685 Brassica rapa Bra025685 I 0.739
Bra004393 Brassica rapa Bra004393 I 0.717
Bra016544 Brassica rapa Bra016544 I 0.761
Bra017404 Brassica rapa Bra017404 I 0.891
Bra024792 Brassica rapa Bra024792 I 0.848
PK03147.1 Cannabis sativa PK03147.1 I 0.848
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.957
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I 0.783
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I 0.826
Carubv10009419m.g Capsella rubella Carubv10009419m.g I 0.826
Carubv10020210m.g Capsella rubella Carubv10020210m.g I 0.783
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.957
evm.TU.supercontig_1.45 Carica papaya evm.TU.supercontig_1.45 N 0.783
Ca_16376 Cicer arietinum Ca_16376 I 0.826
Ca_18082 Cicer arietinum Ca_18082 I 0.804
Cla010361 Citrullus lanatus Cla010361 I 0.804
Cla018884 Citrullus lanatus Cla018884 I 0.739
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I 0.739
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.848
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I 0.739
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.848
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.804
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.739
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I 0.935
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.739
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I 0.739
Thhalv10019726m.g Eutrema salsugineum Thhalv10019726m.g I 0.717
GLYMA07G35610 Glycine max GLYMA07G35610 N 0.761
GLYMA20G04500 Glycine max GLYMA20G04500 N 0.739
Gorai.013G086600 Gossypium raimondii Gorai.013G086600 N 0.783
Gorai.005G142100 Gossypium raimondii Gorai.005G142100 N 0.783
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.826
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.826
Lus10037166.g Linum usitatissimum Lus10037166.g N 0.761
Lus10036761.g Linum usitatissimum Lus10036761.g N 0.739
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.717
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.717
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.804
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.717
MDP0000146415 Malus domestica MDP0000146415 I 0.870
MDP0000147667 Malus domestica MDP0000147667 I 0.870
MDP0000193129 Malus domestica MDP0000193129 I 0.739
MDP0000919323 Malus domestica MDP0000919323 I 0.870
MDP0000773068 Malus domestica MDP0000773068 I 0.870
MDP0000146231 Malus domestica MDP0000146231 I 0.848
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.761
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.783
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.717
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.717
MTR_5g041650 Medicago truncatula MTR_5g041650 I 0.804
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.739
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.717
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.717
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.739
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.761
POPTR_0010s17450 Populus trichocarpa POPTR_0010s17450 N 0.870
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.848
Pm024895 Prunus mume Pm024895 I 0.739
Pm006479 Prunus mume Pm006479 I 0.848
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.848
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.739
30138.m004061 Ricinus communis 30138.m004061 I 0.739
29813.m001508 Ricinus communis 29813.m001508 I 0.804
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.826
SapurV1A.0458s0040 Salix purpurea SapurV1A.0458s0040 I 0.848
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.717
TCM_011687 Theobroma cacao TCM_011687 I 0.826
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.717
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.717
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.717
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.717