AT5G49420 (Arabidopsis thaliana)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 AT5G49420 T252928_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G38620
M10931_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT5G38620_01
0.958 0.958
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G49420.1 MADS box 15 66

Links

Other MADS box family TFs
Other Arabidopsis thaliana TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT5G38620 Arabidopsis thaliana AT5G38620 D 0.958
AGL83 Arabidopsis thaliana AT5G49490 I 0.917
Bostr.15774s0044 Boechera stricta Bostr.15774s0044 I 0.792
Carubv10028105m.g Capsella rubella Carubv10028105m.g N 0.729
Carubv10022197m.g Capsella rubella Carubv10022197m.g I 0.708
Bo8g011140 Brassica oleracea Bo8g011140 N 0.708
AGL99 Arabidopsis thaliana AT5G04640 N 0.708
Bra014217 Brassica rapa Bra014217 N 0.708