BGIOSGA000892 (Oryza indica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 BGIOSGA000892 T252966_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA000892-PA MADS box 10 57

Links

Other MADS box family TFs
Other Oryza indica TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_25533 Aegilops tauschii F775_25533 I 0.708
F775_26271 Aegilops tauschii F775_26271 I 0.702
F775_28377 Aegilops tauschii F775_28377 N 0.938
BRADI2G48690 Brachypodium distachyon BRADI2G48690 N 0.979
Cla002664 Citrullus lanatus Cla002664 I 0.708
Cucsa.392160 Cucumis sativus Cucsa.392160 I 0.708
MLOC_80902 Hordeum vulgare MLOC_80902 N 0.938
MLOC_53973 Hordeum vulgare MLOC_53973 I 0.702
LPERR08G01250 Leersia perrieri LPERR08G01250 I 0.702
LPERR01G25340 Leersia perrieri LPERR01G25340 N 1.000
mgf006616m Mimulus guttatus mgf006616m I 0.708
GSMUA_Achr9G05780_001 Musa acuminata GSMUA_Achr9G05780_001 N 0.896
GSMUA_Achr11G19350_001 Musa acuminata GSMUA_Achr11G19350_001 I 0.702
OBART01G29490 Oryza barthii OBART01G29490 N 1.000
OB01G38450 Oryza brachyantha OB01G38450 N 1.000
OB08G11080 Oryza brachyantha OB08G11080 I 0.702
ORGLA01G0242900 Oryza glaberrima ORGLA01G0242900 N 1.000
OGLUM01G33550 Oryza glumaepatula OGLUM01G33550 N 1.000
BGIOSGA015023 Oryza indica BGIOSGA015023 I 0.700
ONIVA01G33710 Oryza nivara ONIVA01G33710 N 1.000
OPUNC01G29290 Oryza punctata OPUNC01G29290 N 1.000
OPUNC08G01030 Oryza punctata OPUNC08G01030 I 0.702
ORUFI01G32600 Oryza rufipogon ORUFI01G32600 N 1.000
MADS32 Oryza sativa OS01G0726400 N 1.000
Pavir.Eb02653 Panicum virgatum Pavir.Eb02653 N 0.917
Pavir.Ea02667 Panicum virgatum Pavir.Ea02667 N 0.917
Pavir.Da01333 Panicum virgatum Pavir.Da01333 I 0.708
PDK_20s13009472g001 Phoenix dactylifera PDK_20s13009472g001 N 0.875
Si002988m.g Setaria italica Si002988m.g N 0.917
Si007641m.g Setaria italica Si007641m.g I 0.708
Q40172_SOLLC Solanum lycopersicum Q40172_SOLLC I 0.708
Solyc03g019710.2 Solanum lycopersicum Solyc03g019710.2 I 0.708
Sb03g033380 Sorghum bicolor Sb03g033380 N 0.917
Traes_7AS_360247894 Triticum aestivum Traes_7AS_360247894 I 0.700
Traes_3AL_219064574 Triticum aestivum Traes_3AL_219064574 N 0.938
TRAES3BF048900050CFD_g Triticum aestivum TRAES3BF048900050CFD_g N 0.938
Traes_7DL_CAF83263E Triticum aestivum Traes_7DL_CAF83263E I 0.702
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I 0.707
Traes_7DS_05F0F0B64 Triticum aestivum Traes_7DS_05F0F0B64 I 0.708
Traes_7AL_67921A952 Triticum aestivum Traes_7AL_67921A952 I 0.702
Traes_7BL_9BCF391CF Triticum aestivum Traes_7BL_9BCF391CF I 0.702
TRIUR3_13653 Triticum urartu TRIUR3_13653 I 0.702
GRMZM2G079727 Zea mays GRMZM2G079727 N 0.938
GRMZM2G001139 Zea mays GRMZM2G001139 N 0.917