BGIOSGA030217 (Oryza indica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 BGIOSGA030217 T253023_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA030217-PA MADS box 24 71

Links

Other MADS box family TFs
Other Oryza indica TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OLONG_027660 Oryza longistaminata OLONG_027660 N 1.000
OMERI09G00900 Oryza meridionalis OMERI09G00900 N 1.000
OLONG_018222 Oryza longistaminata OLONG_018222 N 1.000
OGLUM09G01140 Oryza glumaepatula OGLUM09G01140 N 1.000
OBART09G00850 Oryza barthii OBART09G00850 N 1.000
OGLUM01G50090 Oryza glumaepatula OGLUM01G50090 N 1.000
ONIVA01G52000 Oryza nivara ONIVA01G52000 N 1.000
ONIVA09G00960 Oryza nivara ONIVA09G00960 N 1.000
OS01G0975800 Oryza sativa OS01G0975800 N 1.000
OS09G0116800 Oryza sativa OS09G0116800 N 1.000
ORUFI09G00870 Oryza rufipogon ORUFI09G00870 N 1.000
ORUFI01G49230 Oryza rufipogon ORUFI01G49230 N 1.000
ORGLA01G0394900 Oryza glaberrima ORGLA01G0394900 N 1.000
ORGLA09G0007400 Oryza glaberrima ORGLA09G0007400 N 1.000
OBART01G45740 Oryza barthii OBART01G45740 N 1.000
OPUNC01G44670 Oryza punctata OPUNC01G44670 N 1.000
BGIOSGA005284 Oryza indica BGIOSGA005284 N 1.000
LPERR01G40130 Leersia perrieri LPERR01G40130 N 0.979
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.979
LPERR02G10390 Leersia perrieri LPERR02G10390 N 0.958
Si019951m.g Setaria italica Si019951m.g I 0.917
OB01G55160 Oryza brachyantha OB01G55160 N 0.917
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.917
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.917
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.917
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.917
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.917
Pavir.Fb00782 Panicum virgatum Pavir.Fb00782 I 0.862
OPUNC09G08220 Oryza punctata OPUNC09G08220 N 0.854
F775_04223 Aegilops tauschii F775_04223 I 0.854
F775_43210 Aegilops tauschii F775_43210 I 0.854
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.854
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.854
BRADI4G39420 Brachypodium distachyon BRADI4G39420 N 0.812
OS09G0402533 Oryza sativa OS09G0402533 N 0.795
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.792
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.792
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.792
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.792
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.792
Si038960m.g Setaria italica Si038960m.g N 0.750
GRMZM2G472100 Zea mays GRMZM2G472100 N 0.750
Sb07g007306 Sorghum bicolor Sb07g007306 N 0.729
Sb07g007373 Sorghum bicolor Sb07g007373 N 0.729
OB06G21580 Oryza brachyantha OB06G21580 N 0.729
Pavir.Bb00803 Panicum virgatum Pavir.Bb00803 N 0.729
AMTR_s00025p00244880 Amborella trichopoda AMTR_s00025p00244880 N 0.729
OBART02G04930 Oryza barthii OBART02G04930 N 0.724
OLONG_000580 Oryza longistaminata OLONG_000580 N 0.717
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N 0.708
TRIUR3_30073 Triticum urartu TRIUR3_30073 I 0.708
Si032189m.g Setaria italica Si032189m.g N 0.708
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N 0.708
ORUFI02G05030 Oryza rufipogon ORUFI02G05030 N 0.708
ONIVA02G05120 Oryza nivara ONIVA02G05120 N 0.708
ONIVA09G00820 Oryza nivara ONIVA09G00820 N 0.708
GRMZM2G459864 Zea mays GRMZM2G459864 N 0.708
OGLUM09G01090 Oryza glumaepatula OGLUM09G01090 N 0.708
OBART09G00790 Oryza barthii OBART09G00790 N 0.708
OGLUM02G04740 Oryza glumaepatula OGLUM02G04740 N 0.708
ORGLA02G0045500 Oryza glaberrima ORGLA02G0045500 N 0.708
ORGLA09G0007100 Oryza glaberrima ORGLA09G0007100 N 0.708
ORUFI09G00820 Oryza rufipogon ORUFI09G00820 N 0.708
BGIOSGA007600 Oryza indica BGIOSGA007600 N 0.708
Sb02g006700 Sorghum bicolor Sb02g006700 N 0.708
BGIOSGA030219 Oryza indica BGIOSGA030219 N 0.708
BRADI1G20090 Brachypodium distachyon BRADI1G20090 N 0.708
OS09G0116000 Oryza sativa OS09G0116000 N 0.708
Traes_7BS_4D5DE99CC Triticum aestivum Traes_7BS_4D5DE99CC I 0.700