Bo1g117390 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo1g117390 T253057_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL103
M10918_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G18650_01 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g117390.1 MADS box 21 66

Links

Other MADS box family TFs
Other Brassica oleracea TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra037571 Brassica rapa Bra037571 N 0.957
Bo5g117290 Brassica oleracea Bo5g117290 I 0.870
Bra022341 Brassica rapa Bra022341 I 0.870
Thhalv10022126m.g Eutrema salsugineum Thhalv10022126m.g I 0.761
Carubv10015986m.g Capsella rubella Carubv10015986m.g I 0.729
Cagra.1681s0033 Capsella grandiflora Cagra.1681s0033 I 0.729
Bo3g071680 Brassica oleracea Bo3g071680 I 0.717
AGL103 Arabidopsis thaliana AT3G18650 D 0.717