Bo4g157220 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo4g157220 T253118_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g157220.1 MADS box 10 57

Links

Other MADS box family TFs
Other Brassica oleracea TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra032057 Brassica rapa Bra032057 N 0.979
Bo8g099550 Brassica oleracea Bo8g099550 N 0.958
Bra007829 Brassica rapa Bra007829 N 0.958
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.917
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.917
AGL61 Arabidopsis thaliana AT2G24840 N 0.917
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.917
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.896
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.896
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.896
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.854
Bra026764 Brassica rapa Bra026764 N 0.854
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.792
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.789
30099.m001671 Ricinus communis 30099.m001671 N 0.771
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.771
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.771
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.771
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N 0.771
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N 0.771
29613.m000367 Ricinus communis 29613.m000367 N 0.771
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.750
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.750
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.750
MDP0000168914 Malus domestica MDP0000168914 N 0.750
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.750
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.750
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.750
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.750
PDK_20s1551551g001 Phoenix dactylifera PDK_20s1551551g001 I 0.750
Pm021070 Prunus mume Pm021070 N 0.750
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.750
MDP0000434703 Malus domestica MDP0000434703 I 0.750
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.750
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.750
Aquca_040_00096 Aquilegia coerulea Aquca_040_00096 N 0.750
mgf024307m Mimulus guttatus mgf024307m N 0.729
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.729
mgf018529m Mimulus guttatus mgf018529m N 0.729
29693.m002042 Ricinus communis 29693.m002042 N 0.729
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.729
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.729
MDP0000233925 Malus domestica MDP0000233925 N 0.729
MDP0000278770 Malus domestica MDP0000278770 N 0.729
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.729
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.729
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.729
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.729
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.729
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.729
evm.TU.contig_43014 Carica papaya evm.TU.contig_43014 N 0.729
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.729
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.729
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.729
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.729
TCM_040735 Theobroma cacao TCM_040735 N 0.729
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.729
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.729
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.729
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.729
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.729
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.729
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.729
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.729
TCM_006323 Theobroma cacao TCM_006323 N 0.729
Ca_07607 Cicer arietinum Ca_07607 N 0.729
Ca_26354 Cicer arietinum Ca_26354 N 0.729
Cla006571 Citrullus lanatus Cla006571 N 0.729
Bo5g113750 Brassica oleracea Bo5g113750 N 0.729
Pm021071 Prunus mume Pm021071 N 0.729
AGL62 Arabidopsis thaliana AT5G60440 I 0.729
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.708
Bo1g112460 Brassica oleracea Bo1g112460 N 0.708
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.708
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.708
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.708
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.708
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.708
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.708
MDP0000221590 Malus domestica MDP0000221590 N 0.708
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.708
Bra038225 Brassica rapa Bra038225 N 0.708
F775_04223 Aegilops tauschii F775_04223 I 0.708
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.708
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.708
Bra022434 Brassica rapa Bra022434 N 0.708
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.708
F775_43210 Aegilops tauschii F775_43210 I 0.708
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.708
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.708
SapurV1A.1128s0080 Salix purpurea SapurV1A.1128s0080 N 0.708
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.708
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.708
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.708
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.708
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.708
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.708
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.708
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.708
TCM_006325 Theobroma cacao TCM_006325 N 0.708
Ca_04659 Cicer arietinum Ca_04659 N 0.708
Ca_04660 Cicer arietinum Ca_04660 N 0.708
29838.m001672 Ricinus communis 29838.m001672 N 0.708
Pm021018 Prunus mume Pm021018 N 0.708
Pm021017 Prunus mume Pm021017 N 0.708
30099.m001672 Ricinus communis 30099.m001672 N 0.708
Ca_04661 Cicer arietinum Ca_04661 N 0.708
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.708
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.708
Pm030655 Prunus mume Pm030655 I 0.708
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.708
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.708
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.708
PRUPE_ppa022494mg Prunus persica PRUPE_ppa022494mg N 0.708
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.708
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.708
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.708
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.708
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.708
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.708
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.708
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.708