Bo4g182590 (Brassica oleracea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bo4g182590 T253120_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL91
M10922_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G66656_01 		0.854 0.854
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g182590.1 MADS box 10 57

Links

Other MADS box family TFs
Other Brassica oleracea TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra021910 Brassica rapa Bra021910 I 1.000
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 1.000
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.979
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.979
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.979
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.979
AGL29 Arabidopsis thaliana AT2G34440 I 0.979
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.854
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.854
AGL91 Arabidopsis thaliana AT3G66656 D 0.854
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.854
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.854
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.833
Bo3g060720 Brassica oleracea Bo3g060720 I 0.812
Bra001209 Brassica rapa Bra001209 I 0.812
Ca_05023 Cicer arietinum Ca_05023 I 0.792
TCM_029518 Theobroma cacao TCM_029518 I 0.771
29693.m002039 Ricinus communis 29693.m002039 I 0.771
Pm030655 Prunus mume Pm030655 I 0.771
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.771
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.771
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.771
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.771
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.771
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.771
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.771
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.750
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.750
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.750
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.750
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.729
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.729
MDP0000274606 Malus domestica MDP0000274606 N 0.729
Lus10040832.g Linum usitatissimum Lus10040832.g N 0.729
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.729
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.729
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.729
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.729
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.729
Ca_24185 Cicer arietinum Ca_24185 I 0.729
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.729
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.729
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.729
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.729
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.729
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.729
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.729
PDK_20s1551551g001 Phoenix dactylifera PDK_20s1551551g001 I 0.708
Cla019897 Citrullus lanatus Cla019897 N 0.708
chr3.CM0059.60.nd Lotus japonicus chr3.CM0059.60.nd N 0.708
Cucsa.212320 Cucumis sativus Cucsa.212320 N 0.708
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.708