Bra024792 (Brassica rapa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bra024792 T253318_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra024792.1-P MADS box 10 55

Links

Other MADS box family TFs
Other Brassica rapa TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI2G45117 Brachypodium distachyon BRADI2G45117 N 0.000
MLOC_73617 Hordeum vulgare MLOC_73617 N 0.000
LPERR01G20990 Leersia perrieri LPERR01G20990 N 0.000
OBART01G24520 Oryza barthii OBART01G24520 N 0.000
ORGLA01G0197900 Oryza glaberrima ORGLA01G0197900 N 0.000
OGLUM01G28380 Oryza glumaepatula OGLUM01G28380 N 0.000
BGIOSGA001121 Oryza indica BGIOSGA001121 N 0.000
OMERI01G24610 Oryza meridionalis OMERI01G24610 N 0.000
ONIVA01G27720 Oryza nivara ONIVA01G27720 N 0.000
OPUNC01G24550 Oryza punctata OPUNC01G24550 N 0.000
ORUFI01G27440 Oryza rufipogon ORUFI01G27440 N 0.000
OS01G0646300 Oryza sativa OS01G0646300 N 0.000
Pavir.J09720 Panicum virgatum Pavir.J09720 N 0.000
Si001293m.g Setaria italica Si001293m.g N 0.000
Sb03g029470 Sorghum bicolor Sb03g029470 N 0.000
TRAES3BF178300020CFD_g Triticum aestivum TRAES3BF178300020CFD_g N 0.000
GRMZM5G826526 Zea mays GRMZM5G826526 N 0.000
GRMZM2G001426 Zea mays GRMZM2G001426 N 0.000