TF Information

Bra026507 *(Brassica rapa)* MADS box
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00319 (SRF-TF)	IPR002100	Bra026507	T253325_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
FBP24_PETHY M10997_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP24_01	0.792	0.792
Q9ATE3_PETHY M11008_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP28_01	0.729	0.729
Q9ATE2_PETHY M11007_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP29_01	0.729	0.729
Q8GT99_TOBAC M11006_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS11_02	0.729	0.729
MADS50 M10968_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS50_01	0.729	0.729
Q9SBQ1_PETHY M11017_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PFG_01	0.729	0.729
AGL15 M06992_2.00	Arabidopsis thaliana	WNTTWCCHAAWDWRGAAAN	NTTTCYWHWTTDGGWAANW	Dap-seq OMalley et al.(2016) AGL15_col_a	0.708	0.708
AGL15 M06993_2.00	Arabidopsis thaliana	DNTTWCCHAAWDDRGAAANHH	DDNTTTCYHHWTTDGGWAANH	Dap-seq OMalley et al.(2016) AGL15_colamp_a	0.708	0.708
AGL42 M06995_2.00	Arabidopsis thaliana	RATGATG	CATCATY	Dap-seq OMalley et al.(2016) AGL42_col_a	0.708	0.708
squamosa M02697_2.00	Antirrhinum majus	MYAWAWAWRGHAAN	NTTDCYWTWTWTRK	SELEX Mathelier et al.(2014) MA0082.1	0.708	0.708
SOC1 M08425_2.00	Arabidopsis thaliana	CCAAAAAWRGAAAND	HNTTTCYWTTTTTGG	ChIP-chip Mathelier et al.(2014) MA0554.1	0.708	0.708
AGL15 M10927_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AGL15_01	0.708	0.708
AGL15 M10928_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AGL15_02	0.708	0.708
SOC1 M10915_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AGL20_01	0.708	0.708
Q9LEI3_HORVU M10985_2.00	Hordeum vulgare	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BM3_01	0.708	0.708
Q40882_PETHY M11003_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP11_01	0.708	0.708
Q9ATE8_PETHY M11011_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP21_01	0.708	0.708
Q40591_TOBAC M11002_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS1_03	0.708	0.708
O82699_MALDO M11022_2.00	Malus domestica	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS11_01	0.708	0.708
Q7X9I6_MALDO M11023_2.00	Malus domestica	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS12_02	0.708	0.708
Q8VWZ3_MALDO M11025_2.00	Malus domestica	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS14_02	0.708	0.708
MADS18 M10973_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS18_01	0.708	0.708
Q38742_ANTMA M11000_2.00	Antirrhinum majus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$SQUA_01	0.708	0.708
For this family, TFs with SR scores > 0.700* will likely have a similar motif*