TF Information

Bra029365 *(Brassica rapa)* MADS box
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00319 (SRF-TF)	IPR002100	Bra029365	T253342_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
SVP M06984_2.00	Arabidopsis thaliana	DDCCVAAWANGGHAA	TTDCCNTWTTBGGHH	Dap-seq OMalley et al.(2016) SVP_colamp_v3b	0.708	0.708
SVP M06985_2.00	Arabidopsis thaliana	CCMAAWANGGWAANW	WNTTWCCNTWTTKGG	Dap-seq OMalley et al.(2016) SVP_col_v3b	0.708	0.708
SVP M08424_2.00	Arabidopsis thaliana	NWWHCCMAAAADGGAAARHH	DDYTTTCCHTTTTKGGDWWN	ChIP-chip Mathelier et al.(2014) MA0555.1	0.708	0.708
A1YJE4_HORVD M10900_2.00	Hordeum vulgare	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BM10_01	0.708	0.708
Q9LEI3_HORVU M10985_2.00	Hordeum vulgare	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BM3_01	0.708	0.708
FBP24_PETHY M10997_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP24_01	0.708	0.708
Q8GT99_TOBAC M11006_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS11_02	0.708	0.708
MADS50 M10968_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS50_01	0.708	0.708
Q9SBQ1_PETHY M11017_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PFG_01	0.708	0.708
Q84LI3_WHEAT M10979_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TAVRT1_01	0.708	0.708
O82128_WHEAT M10965_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WAP1_01	0.708	0.708
For this family, TFs with SR scores > 0.700* will likely have a similar motif*