CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra033492
(
Brassica rapa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bra033492
T253357_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra033492.1-P
MADS box
3
54
RITKRESAATTFTKRSYGLHSKVSQLCLLTDAQIAVLATPPSSHSNVSFFSF
Links
Other
MADS box
family TFs
Other
Brassica rapa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo21950s010
Brassica oleracea
Bo21950s010
N
0.875
Bo4g127230
Brassica oleracea
Bo4g127230
N
0.875
Bo4g127100
Brassica oleracea
Bo4g127100
N
0.875
Thhalv10029256m.g
Eutrema salsugineum
Thhalv10029256m.g
N
0.792
Thhalv10029235m.g
Eutrema salsugineum
Thhalv10029235m.g
N
0.750
Bo7g092850
Brassica oleracea
Bo7g092850
N
0.729
Bra037434
Brassica rapa
Bra037434
N
0.729
Bra010027
Brassica rapa
Bra010027
N
0.708