Bra041022 (Brassica rapa)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Bra041022 T253380_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.778 0.778
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra041022.1-P MADS box 10 55

Links

Other MADS box family TFs
Other Brassica rapa TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pc22g00480 Penicillium chrysogenum Pc22g00480 N 0.000
PDE_08065 Penicillium oxalicum PDE_08065 N 0.000
U727_00433740401 Penicillium solitum U727_00433740401 N 0.000