CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G27900
(
Brachypodium distachyon
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
BRADI1G27900
T253386_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G27900.1
MADS box
13
60
PIADTSRRQVTFSKRRSGLFKKASELCALCGADLALVVFSPAGRAFAF
Links
Other
MADS box
family TFs
Other
Brachypodium distachyon
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_7DL_A773A64E2
Triticum aestivum
Traes_7DL_A773A64E2
N
0.756
evm.TU.supercontig_20.86
Carica papaya
evm.TU.supercontig_20.86
N
0.750
MTR_1g108510
Medicago truncatula
MTR_1g108510
N
0.729
MTR_3g030770
Medicago truncatula
MTR_3g030770
N
0.729
MTR_2g030740
Medicago truncatula
MTR_2g030740
N
0.729
chr5.LjT39E05.40.nd
Lotus japonicus
chr5.LjT39E05.40.nd
N
0.729
TRIUR3_21732
Triticum urartu
TRIUR3_21732
I
0.721
F775_21960
Aegilops tauschii
F775_21960
N
0.711
Si019951m.g
Setaria italica
Si019951m.g
I
0.708
LjSGA_079719.1
Lotus japonicus
LjSGA_079719.1
N
0.708
Sb09g029120
Sorghum bicolor
Sb09g029120
I
0.708
OS06G0108500
Oryza sativa
OS06G0108500
I
0.708
ORUFI06G00550
Oryza rufipogon
ORUFI06G00550
I
0.708
Pavir.J00788
Panicum virgatum
Pavir.J00788
I
0.708
Ca_07607
Cicer arietinum
Ca_07607
N
0.708
ORGLA06G0005200
Oryza glaberrima
ORGLA06G0005200
I
0.708
chr1.CM0088.830.nc
Lotus japonicus
chr1.CM0088.830.nc
N
0.708
Aquca_041_00050
Aquilegia coerulea
Aquca_041_00050
N
0.708
Pavir.J11717
Panicum virgatum
Pavir.J11717
I
0.708
Ca_26354
Cicer arietinum
Ca_26354
N
0.708
Aquca_054_00126
Aquilegia coerulea
Aquca_054_00126
N
0.708
OMERI06G00470
Oryza meridionalis
OMERI06G00470
I
0.708
MTR_1g105910
Medicago truncatula
MTR_1g105910
N
0.708
MTR_1g105920
Medicago truncatula
MTR_1g105920
N
0.708
MTR_2g093190
Medicago truncatula
MTR_2g093190
N
0.708
LPERR01G04800
Leersia perrieri
LPERR01G04800
N
0.708
GRMZM5G891280
Zea mays
GRMZM5G891280
I
0.708
BGIOSGA022154
Oryza indica
BGIOSGA022154
I
0.708
GLYMA20G27330
Glycine max
GLYMA20G27330
N
0.708
GLYMA20G27350
Glycine max
GLYMA20G27350
N
0.708
MTR_3g052870
Medicago truncatula
MTR_3g052870
N
0.708
MTR_3g052920
Medicago truncatula
MTR_3g052920
N
0.708
OGLUM06G00450
Oryza glumaepatula
OGLUM06G00450
I
0.708
AC234185.1_FG006
Zea mays
AC234185.1_FG006
I
0.708
ONIVA06G00530
Oryza nivara
ONIVA06G00530
I
0.708
OBART06G00520
Oryza barthii
OBART06G00520
I
0.708
MTR_8g043650
Medicago truncatula
MTR_8g043650
N
0.708
OPUNC06G14730
Oryza punctata
OPUNC06G14730
N
0.708
MTR_3g080940
Medicago truncatula
MTR_3g080940
N
0.708
Traes_7DS_366A869CF
Triticum aestivum
Traes_7DS_366A869CF
I
0.707