BRADI4G11097 (Brachypodium distachyon)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 BRADI4G11097 T253425_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL65
M10901_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGL65_01 		0.739 0.739
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G11097.1 MADS box 10 55

Links

Other MADS box family TFs
Other Brachypodium distachyon TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_13266 Aegilops tauschii F775_13266 I 0.957
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.957
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.957
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.957
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.957
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.957
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.915
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.915
OGLUM11G21110 Oryza glumaepatula OGLUM11G21110 N 0.913
OLONG_008007 Oryza longistaminata OLONG_008007 N 0.913
ORGLA11G0175900 Oryza glaberrima ORGLA11G0175900 N 0.891
OBART11G21780 Oryza barthii OBART11G21780 N 0.891
ORUFI11G23650 Oryza rufipogon ORUFI11G23650 N 0.891
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.891
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.891
LPERR11G18320 Leersia perrieri LPERR11G18320 N 0.891
OS11G0658700 Oryza sativa OS11G0658700 N 0.891
OMERI11G18020 Oryza meridionalis OMERI11G18020 N 0.870
Si028357m.g Setaria italica Si028357m.g N 0.870
BGIOSGA035654 Oryza indica BGIOSGA035654 N 0.870
OPUNC11G18320 Oryza punctata OPUNC11G18320 N 0.848
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.848
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.848
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.830
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.826
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.826
TCM_014051 Theobroma cacao TCM_014051 I 0.826
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.826
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.809
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.804
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.804
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.792
PK21701.1 Cannabis sativa PK21701.1 I 0.792
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.783
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.783
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.771
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.771
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.761
Pm024895 Prunus mume Pm024895 I 0.761
cassava17346.m1 Manihot esculenta cassava17346.m1 I 0.761
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.750
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.750
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.750
AGL65 Vitis vinifera VIT_17s0000g06340 I 0.750
Cla010361 Citrullus lanatus Cla010361 I 0.739
29813.m001508 Ricinus communis 29813.m001508 I 0.739
Bo9g072860 Brassica oleracea Bo9g072860 N 0.739
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I 0.729
Bra016544 Brassica rapa Bra016544 I 0.729
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.729
Bra031049 Brassica rapa Bra031049 I 0.729
Bo8g068060 Brassica oleracea Bo8g068060 I 0.729
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I 0.729
MDP0000193129 Malus domestica MDP0000193129 I 0.729
Bo8g104060 Brassica oleracea Bo8g104060 I 0.729
30138.m004061 Ricinus communis 30138.m004061 I 0.729
Bra025685 Brassica rapa Bra025685 I 0.723
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.723
orange1.1g018825m.g Citrus sinensis orange1.1g018825m.g I 0.717
PK03147.1 Cannabis sativa PK03147.1 I 0.717
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.717
SapurV1A.0149s0010 Salix purpurea SapurV1A.0149s0010 N 0.717
Bra017404 Brassica rapa Bra017404 I 0.717
Lus10026613.g Linum usitatissimum Lus10026613.g I 0.717
Ciclev10031963m.g Citrus clementina Ciclev10031963m.g I 0.717
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.717
Cucsa.112840 Cucumis sativus Cucsa.112840 I 0.717
Cla018884 Citrullus lanatus Cla018884 I 0.717
Lus10030450.g Linum usitatissimum Lus10030450.g I 0.717
Ca_16376 Cicer arietinum Ca_16376 I 0.717
cassava12018.valid.m1 Manihot esculenta cassava12018.valid.m1 I 0.717
TCM_011687 Theobroma cacao TCM_011687 I 0.717
POPTR_0008s08780 Populus trichocarpa POPTR_0008s08780 I 0.717
AGL65 Arabidopsis thaliana AT1G18750 D 0.708
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I 0.708
AGL65 Arabidopsis lyrata fgenesh2_kg.1__2055__AT1G18750.1 I 0.708