BRADI4G30090 (Brachypodium distachyon)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 BRADI4G30090 T253426_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.721 0.721
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G30090.1 MADS box 71 113

Links

Other MADS box family TFs
Other Brachypodium distachyon TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART01G42170 Oryza barthii OBART01G42170 I 0.884
BGIOSGA005076 Oryza indica BGIOSGA005076 I 0.884
OGLUM01G46440 Oryza glumaepatula OGLUM01G46440 I 0.884
LPERR01G36730 Leersia perrieri LPERR01G36730 I 0.884
ONIVA01G48250 Oryza nivara ONIVA01G48250 I 0.884
OMERI01G39210 Oryza meridionalis OMERI01G39210 I 0.884
ORGLA01G0361900 Oryza glaberrima ORGLA01G0361900 I 0.884
OPUNC01G41110 Oryza punctata OPUNC01G41110 I 0.884
Pavir.Bb00005 Panicum virgatum Pavir.Bb00005 I 0.875
Sb03g044170 Sorghum bicolor Sb03g044170 I 0.860
GRMZM2G171650 Zea mays GRMZM2G171650 I 0.860
BRADI2G59187 Brachypodium distachyon BRADI2G59187 I 0.860
TRIUR3_28473 Triticum urartu TRIUR3_28473 I 0.860
Traes_7BS_4D5DE99CC Triticum aestivum Traes_7BS_4D5DE99CC I 0.833
MLOC_12290 Hordeum vulgare MLOC_12290 I 0.814
TRAES3BF009000010CFD_g Triticum aestivum TRAES3BF009000010CFD_g I 0.792
BRADI2G59120 Brachypodium distachyon BRADI2G59120 I 0.771
Pavir.J02739 Panicum virgatum Pavir.J02739 I 0.771
TRIUR3_30872 Triticum urartu TRIUR3_30872 I 0.771
Si004582m.g Setaria italica Si004582m.g I 0.771
TRIUR3_21732 Triticum urartu TRIUR3_21732 I 0.767
Sb03g006210 Sorghum bicolor Sb03g006210 I 0.750
MADS51 Oryza sativa OS01G0922800 I 0.750
ORUFI01G45590 Oryza rufipogon ORUFI01G45590 I 0.750
Pavir.J08622 Panicum virgatum Pavir.J08622 I 0.745
TRIUR3_19056 Triticum urartu TRIUR3_19056 I 0.729
F775_43625 Aegilops tauschii F775_43625 I 0.729
TRAES3BF009000040CFD_g Triticum aestivum TRAES3BF009000040CFD_g I 0.729
TRIUR3_20985 Triticum urartu TRIUR3_20985 I 0.729
GRMZM2G320549 Zea mays GRMZM2G320549 I 0.729
GSMUA_AchrUn_randomG20290_001 Musa acuminata GSMUA_AchrUn_randomG20290_001 I 0.729
OPUNC08G18260 Oryza punctata OPUNC08G18260 I 0.721
Traes_6AS_D6ABA1D79 Triticum aestivum Traes_6AS_D6ABA1D79 I 0.721
F775_10590 Aegilops tauschii F775_10590 I 0.721
VIT_15s0048g01240 Vitis vinifera VIT_15s0048g01240 I 0.721
BRADI3G41297 Brachypodium distachyon BRADI3G41297 I 0.721
GRMZM2G098986 Zea mays GRMZM2G098986 I 0.721
Pavir.J26790 Panicum virgatum Pavir.J26790 I 0.721
Traes_6DS_2BAD7A60A Triticum aestivum Traes_6DS_2BAD7A60A I 0.721
BRADI3G00730 Brachypodium distachyon BRADI3G00730 I 0.721
Si015525m.g Setaria italica Si015525m.g I 0.721
Si014540m.g Setaria italica Si014540m.g I 0.721
Traes_7AS_F568FCBF1 Triticum aestivum Traes_7AS_F568FCBF1 I 0.717
GSMUA_Achr11G15560_001 Musa acuminata GSMUA_Achr11G15560_001 I 0.708
TRIUR3_30073 Triticum urartu TRIUR3_30073 I 0.708
GSMUA_Achr8G09250_001 Musa acuminata GSMUA_Achr8G09250_001 I 0.708
Pavir.J19662 Panicum virgatum Pavir.J19662 I 0.702