Cob_13332 (Colletotrichum orbiculare)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 Cob_13332 T253506_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SMP1
M01557_2.00
Saccharomyces cerevisiae
TTAATAAA

TTTATTAA
PBM
Zhu et al.(2009)
Smp1
0.771 0.771
SMP1
M08587_2.00
Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN

NNBWNNYWYAATTRWRKVHNV
Misc
DeBoer et al.(2011)
YBR182C_864
0.771 0.771
RLM1
M08590_2.00
Saccharomyces cerevisiae
NTAWWWWTAG

CTAWWWWTAN
Misc
DeBoer et al.(2011)
YPL089C_419
0.729 0.729
RLM1
M08459_2.00
Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN

NDRKCTATWWWTAGAWHN
COMPILED
Mathelier et al.(2014)
MA0369.1
0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENH77322 MADS box 10 57

Links

Other MADS box family TFs
Other Colletotrichum orbiculare TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
KLLA0_F26961g Kluyveromyces lactis KLLA0_F26961g D 0.000
CaO19.4752 Candida albicans CaO19.4752 D 0.000
LALA0_S09e05358g Lachancea lanzarotensis LALA0_S09e05358g I 0.000
LELG_00530 Lodderomyces elongisporus LELG_00530 I 0.000
NCAS_0A12910 Naumovozyma castellii NCAS_0A12910 I 0.000
PAS_chr2-1_0723 Komagataella pastoris PAS_chr2-1_0723 I 0.000
PICST_33273 Scheffersomyces stipitis PICST_33273 I 0.000
TPHA_0C02580 Tetrapisispora phaffii TPHA_0C02580 I 0.000
fgenesh1_pg.C_chr_7.1000062 Pichia stipitis fgenesh1_pg.C_chr_7.1000062 I 0.000
Scas_Contig709.32 Saccharomyces castellii Scas_Contig709.32 I 0.000
KLTH0D08734g Kluyveromyces thermotolerans KLTH0D08734g I 0.000
Kwal_8351 Kluyveromyces waltii Kwal_8351 I 0.000
SAKL0B11330g Lachancea kluyveri SAKL0B11330g I 0.000
KLTH0D08734g Lachancea thermotolerans KLTH0D08734g I 0.000
CLUG_01356 Candida lusitaniae CLUG_01356 I 0.000
GNLVRS01_PISO0F07089g Millerozyma farinosa GNLVRS01_PISO0F07089g I 0.000
PGUG_01635 Candida guilliermondii PGUG_01635 I 0.000
CANTEDRAFT_134781 Candida tenuis CANTEDRAFT_134781 I 0.000
CaO19.12215 Candida albicans CaO19.12215 I 0.000
CD36_08440 Candida dubliniensis CD36_08440 I 0.000
CLUG_01356 Clavispora lusitaniae CLUG_01356 I 0.000
CORT_0A05380 Candida orthopsilosis CORT_0A05380 I 0.000
CTRG_03253 Candida tropicalis CTRG_03253 I 0.000
DEHA2A08382g Debaryomyces hansenii DEHA2A08382g I 0.000
G210_5389 Candida maltosa G210_5389 I 0.000
GNLVRS01_PISO0E05768g Millerozyma farinosa GNLVRS01_PISO0E05768g I 0.000
XP_002491652.1 Pichia pastoris XP_002491652.1 I 0.000
CPAG_03960 Candida parapsilosis CPAG_03960 N 0.000