CPIJ016459 (Culex quinquefasciatus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 CPIJ016459 T253527_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
bs
M03915_2.00
Drosophila melanogaster
NCCWTATAWGGN

NCCWTATAWGGN
SELEX
Nitta et al.(2015)
bs_1
0.957 0.957
bs
M03916_2.00
Drosophila melanogaster
NCCWTAHAWGGH

DCCWTDTAWGGN
SELEX
Nitta et al.(2015)
bs_2
0.957 0.957
Srf
M00178_2.00
Mus musculus
NNDDWWHHNN

NNDDWWHHNN
PBM
Badis et al.(2009)
Srf_3509
0.913 0.913
unc-120
M00684_2.00
Caenorhabditis elegans
CHWAWWDGG

CCHWWTWDG
PBM
Narasimhan et al.(2015)
pTH10822
0.913 0.913
SRF
M03341_2.00
Homo sapiens
DCCWTATATGGT

ACCATATAWGGH
SELEX
Jolma et al.(2013)
SRF_1
0.913 0.913
SRF
M03342_2.00
Homo sapiens
TKHCCWTATATGGKMA

TKMCCATATAWGGDMA
SELEX
Jolma et al.(2013)
SRF_2
0.913 0.913
SRF
M05553_2.00
Homo sapiens
CCNTANAWGG

CCWTNTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX
0.913 0.913
SRF
M07981_2.00
Homo sapiens
NNNWDNCCAWAWAWGGNVD

HBNCCWTWTWTGGNHWNNN
ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha
0.913 0.913
SRF
M07982_2.00
Homo sapiens
CCAWATAAGGNMAD

HTKNCCTTATWTGG
ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha
0.913 0.913
SRF
M07983_2.00
Homo sapiens
NNWNNCCAWAWAWGGNVD

HBNCCWTWTWTGGNNWNN
ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha
0.913 0.913
SRF
M07984_2.00
Homo sapiens
GNCCAWATADGGHMANN

NNTKDCCHTATWTGGNC
ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha
0.913 0.913
SRF
M09249_2.00
Homo sapiens
HNWBVCCAWAWAWGGNRR

YYNCCWTWTWTGGBVWND
Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A
0.913 0.913
Srf
M09254_2.00
Mus musculus
NWDVCCAWAWAWGGVMR

YKBCCWTWTWTGGBHWN
Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A
0.913 0.913
Srf
M09598_2.00
Mus musculus
CCWWATWWGGNH

DNCCWWATWWGG
Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al.
0.913 0.913
SRF
M10947_2.00
Homo sapiens
MNBWCCWTATAWGGGCAT

ATGCCCWTATAWGGWVNK
Transfac
Matys et al.(2006)
V$SRF_01
0.913 0.913
SRF
M10948_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_02
0.913 0.913
SRF
M10949_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_03
0.913 0.913
SRF
M10950_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_09
0.913 0.913
SRF
M10951_2.00
Homo sapiens
DCCWTATAWGGVSHB

VDSBCCWTATAWGGH
Transfac
Matys et al.(2006)
V$SRF_C
0.913 0.913
SRF
M10952_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q3
0.913 0.913
SRF
M10953_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q4
0.913 0.913
SRF
M10954_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_01
0.913 0.913
SRF
M10955_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_02
0.913 0.913
SRF
M10956_2.00
Homo sapiens
BNCCAWATAWGGVN

NBCCWTATWTGGNV
Transfac
Matys et al.(2006)
V$SRF_Q6
0.913 0.913
SRF
M05554_2.00
Homo sapiens
CCNTAYAWGG

CCWTRTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX
0.913 0.913
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPIJ016459-PA MADS box 281 303

Links

Other MADS box family TFs
Other Culex quinquefasciatus TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL010925 Aedes aegypti AAEL010925 I 0.870
AALB009947 Anopheles albimanus AALB009947 I 0.957
AARA006326 Anopheles arabiensis AARA006326 I 0.957
AATE005744 Anopheles atroparvus AATE005744 I 0.957
ACAC_0000939001 Angiostrongylus cantonensis ACAC_0000939001 I 0.913
ACEP12187 Atta cephalotes ACEP12187 I 0.957
ACHR006794 Anopheles christyi ACHR006794 I 0.957
ACOC_0000094701 Angiostrongylus costaricensis ACOC_0000094701 I 0.913
ACOM041695 Anopheles coluzzii ACOM041695 I 0.957
ACUA001543 Anopheles culicifacies ACUA001543 I 0.957
ACYPI002973 Acyrthosiphon pisum ACYPI002973 I 0.913
ADIR000345 Anopheles dirus ADIR000345 N 0.957
AEPI007009 Anopheles epiroticus AEPI007009 I 0.957
AFAF006302 Anopheles farauti AFAF006302 I 0.957
AFUN006149 Anopheles funestus AFUN006149 I 0.957
AGAP010511 Anopheles gambiae AGAP010511 I 0.957
ALUE_0001693901 Ascaris lumbricoides ALUE_0001693901 I 0.913
AMAM005702 Anopheles maculatus AMAM005702 I 0.957
AMEC009624 Anopheles melas AMEC009624 I 0.957
AMIN001256 Anopheles minimus AMIN001256 I 0.957
ANCCAN_16750 Ancylostoma caninum ANCCAN_16750 I 0.913
ANCCEY_11374 Ancylostoma ceylanicum ANCCEY_11374 I 0.913
ANCCEY_13649 Ancylostoma ceylanicum ANCCEY_13649 I 0.913
ANCDUO_13359 Ancylostoma duodenale ANCDUO_13359 I 0.913
ANCDUO_18278 Ancylostoma duodenale ANCDUO_18278 I 0.913
Aqu1.224560 Amphimedon queenslandica Aqu1.224560 I 0.870
AQUA001309 Anopheles quadriannulatus AQUA001309 I 0.957
ASIM_0002132201 Anisakis simplex ASIM_0002132201 I 0.913
ASTEI07121 Anopheles stephensi ASTEI07121 I 0.957
ASU_11865 Ascaris suum ASU_11865 I 0.913
ASU_14961 Ascaris suum ASU_14961 I 0.913
BGIBMGA001382 Bombyx mori BGIBMGA001382 I 0.957
BGLB003854 Biomphalaria glabrata BGLB003854 I 0.870
Bm3022 Brugia malayi Bm3022 I 0.913
Bm7708 Brugia malayi Bm7708 I 0.913
bs Drosophila melanogaster FBgn0004101 D 0.957
BTMF_0000835601 Brugia timori BTMF_0000835601 I 0.913
CapteG221100 Capitella teleta CapteG221100 I 0.870
CBG12542 Caenorhabditis briggsae CBG12542 I 0.913
CBN00046 Caenorhabditis brenneri CBN00046 I 0.913
CBN02826 Caenorhabditis brenneri CBN02826 I 0.913
Cflo_11261--XP_001120126.1_APIME Camponotus floridanus Cflo_11261--XP_001120126.1_APIME I 0.957
CGI_10019446 Crassostrea gigas CGI_10019446 I 0.870
CJA08385 Caenorhabditis japonica CJA08385 I 0.913
CLEC013393 Cimex lectularius CLEC013393 I 0.957
CPIJ008336 Culex quinquefasciatus CPIJ008336 I 0.957
CpipJ_CPIJ008336 Culex pipiens CpipJ_CPIJ008336 I 0.957
CpipJ_CPIJ016459 Culex pipiens CpipJ_CPIJ016459 I 1.000
CRE29464 Caenorhabditis remanei CRE29464 I 0.913
D917_02561 Trichinella nativa D917_02561 I 0.913
D918_07967 Trichuris suis D918_07967 I 0.913
DAPPUDRAFT_8703 Daphnia pulex DAPPUDRAFT_8703 I 0.913
DICVIV_07203 Dictyocaulus viviparus DICVIV_07203 I 0.913
DME_0000010001 Dracunculus medinensis DME_0000010001 I 0.913
EEL_0000867301 Elaeophora elaphi EEL_0000867301 I 0.913
EFV60876 Trichinella spiralis EFV60876 I 0.913
ENSAMEG00000012452 Ailuropoda melanoleuca ENSAMEG00000012452 I 0.913
ENSAMXG00000001100 Astyanax mexicanus ENSAMXG00000001100 I 0.913
ENSAMXG00000003129 Astyanax mexicanus ENSAMXG00000003129 I 0.913
ENSBTAP00000016981-D1 Bos grunniens ENSBTAP00000016981-D1 I 0.913
ENSCSAG00000011622 Chlorocebus sabaeus ENSCSAG00000011622 I 0.913
ENSCSAVG00000008682 Ciona savignyi ENSCSAVG00000008682 I 0.870
ENSGMOG00000008883 Gadus morhua ENSGMOG00000008883 I 0.913
ENSLACG00000014404 Latimeria chalumnae ENSLACG00000014404 I 0.913
ENSLOCG00000015887 Lepisosteus oculatus ENSLOCG00000015887 I 0.913
ENSMICG00000008327 Microcebus murinus ENSMICG00000008327 I 0.913
ENSMPUG00000013090 Mustela putorius furo ENSMPUG00000013090 I 0.913
ENSNLEG00000004203 Nomascus leucogenys ENSNLEG00000004203 I 0.913
ENSONIG00000010161 Oreochromis niloticus ENSONIG00000010161 I 0.913
ENSONIG00000010505 Oreochromis niloticus ENSONIG00000010505 I 0.913
ENSPANG00000006410 Papio anubis ENSPANG00000006410 I 0.913
ENSPFOG00000018770 Poecilia formosa ENSPFOG00000018770 I 0.913
ENSPFOG00000022718 Poecilia formosa ENSPFOG00000022718 I 0.913
ENSPPYG00000016633 Pongo abelii ENSPPYG00000016633 I 0.913
ENSSTOG00000014222 Ictidomys tridecemlineatus ENSSTOG00000014222 I 0.913
ENSXMAG00000006964 Xiphophorus maculatus ENSXMAG00000006964 I 0.913
ENSXMAG00000018559 Xiphophorus maculatus ENSXMAG00000018559 I 0.913
EVEC_0001294401 Enterobius vermicularis EVEC_0001294401 N 0.913
fgenesh2_pg.scaffold_196000035 Branchiostoma floridae fgenesh2_pg.scaffold_196000035 I 0.913
fgenesh2_pg.scaffold_8000100 Branchiostoma floridae fgenesh2_pg.scaffold_8000100 I 0.913
GA17433 Drosophila pseudoobscura FBgn0077446 I 0.957
GB47234 Apis mellifera GB47234 I 0.957
GD11852 Drosophila simulans FBgn0183591 I 0.957
GE14398 Drosophila yakuba FBgn0232006 I 0.957
GF11392 Drosophila ananassae FBgn0088432 I 0.957
GG22961 Drosophila erecta FBgn0115118 I 0.957
GH20989 Drosophila grimshawi FBgn0128451 I 0.957
GI21322 Drosophila mojavensis FBgn0144052 I 0.957
GJ21595 Drosophila virilis FBgn0208714 I 0.957
GK22205 Drosophila willistoni FBgn0224190 I 0.957
GL20046 Drosophila persimilis FBgn0157643 I 0.957
GLOINDRAFT_82941 Rhizophagus irregularis GLOINDRAFT_82941 I 0.739
GM11854 Drosophila sechellia FBgn0166795 I 0.957
GPUH_0001673101 Gongylonema pulchrum GPUH_0001673101 I 0.913
HCOI01934200 Haemonchus contortus HCOI01934200 I 0.913
HelroG137972 Helobdella robusta HelroG137972 I 0.783
HHAL001484-PA Halyomorpha halys HHAL001484-PA I 0.957
HMEL017831 Heliconius melpomene HMEL017831 I 0.957
HPBE_0000920601 Heligmosomoides bakeri HPBE_0000920601 I 0.913
Hsal_11632--XP_001120126.1_APIME Harpegnathos saltator Hsal_11632--XP_001120126.1_APIME I 0.957
ISCW019966 Ixodes scapularis ISCW019966 I 0.913
KAFR_0B05280 Kazachstania africana KAFR_0B05280 I 0.739
KGM_22252 Danaus plexippus KGM_22252 I 0.957
L596_g5274 Steinernema carpocapsae L596_g5274 I 0.870
L798_08800 Zootermopsis nevadensis L798_08800 I 0.957
L889_g24087 Steinernema feltiae L889_g24087 I 0.870
L892_g14520 Steinernema scapterisci L892_g14520 I 0.870
L893_g14743 Steinernema glaseri L893_g14743 I 0.870
L898_g9834 Steinernema monticolum L898_g9834 I 0.870
LCUP011662 Lucilia cuprina LCUP011662 I 0.957
LDEC007646 Leptinotarsa decemlineata LDEC007646 I 0.913
LOAG_01601 Loa loa LOAG_01601 I 0.913
LotgiG59850 Lottia gigantea LotgiG59850 I 0.870
MDOA002443 Musca domestica MDOA002443 I 0.957
MESCA004860 Megaselia scalaris MESCA004860 I 0.957
MhA1_Contig1835.frz3.fgene2 Meloidogyne hapla MhA1_Contig1835.frz3.fgene2 I 0.913
ML154140a Mnemiopsis leidyi ML154140a I 0.870
nAv.1.0.1.g08666 Acanthocheilonema viteae nAv.1.0.1.g08666 I 0.913
NBR_0001475101 Nippostrongylus brasiliensis NBR_0001475101 I 0.913
nDi.2.2.2.g03920 Dirofilaria immitis nDi.2.2.2.g03920 I 0.913
NECAME_15797 Necator americanus NECAME_15797 I 0.913
NEMVEDRAFT_v1g164599 Nematostella vectensis NEMVEDRAFT_v1g164599 I 0.870
nLs.2.1.2.g09548 Litomosoides sigmodontis nLs.2.1.2.g09548 I 0.913
nOo.2.0.1.g11137 Onchocerca ochengi nOo.2.0.1.g11137 I 0.913
NV18787 Nasonia vitripennis NV18787 I 0.957
Ocbimv22020285m.g Octopus bimaculoides Ocbimv22020285m.g I 0.870
OESDEN_12192 Oesophagostomum dentatum OESDEN_12192 I 0.913
OFLC_0001346401 Onchocerca flexuosa OFLC_0001346401 I 0.913
Ppa-unc-120 Pristionchus pacificus PPA14131 I 0.913
PPAI006358 Phlebotomus papatasi PPAI006358 I 0.957
PTRK_0001139200 Parastrongyloides trichosuri PTRK_0001139200 I 0.913
Pvit_03053 Pogona vitticeps Pvit_03053 I 0.913
RO3G_00948 Rhizopus oryzae RO3G_00948 I 0.739
RPRC001752 Rhodnius prolixus RPRC001752 I 0.957
RSKR_0001102000 Rhabditophanes kr3021 RSKR_0001102000 I 0.913
Sakowv30019106m.g Saccoglossus kowalevskii Sakowv30019106m.g I 0.913
SBAD_0000850501 Soboliphyme baturini SBAD_0000850501 I 0.913
scaffold2825-EXSNAP2012.1 Pristionchus exspectatus scaffold2825-EXSNAP2012.1 I 0.913
scaffold690-EXSNAP2012.12 Pristionchus exspectatus scaffold690-EXSNAP2012.12 I 0.913
SINV23963 Solenopsis invicta SINV23963 I 0.957
SMAR003014 Strigamia maritima SMAR003014 I 0.913
snap_masked-nMf.1.1.scaf02542-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf02542-processed-gene-0.2 N 0.913
SPAL_0000748100 Strongyloides papillosus SPAL_0000748100 I 0.913
SPPG_06208 Spizellomyces punctatus SPPG_06208 I 0.739
SPU_027774 Strongylocentrotus purpuratus SPU_027774 I 0.870
SRF Canis familiaris ENSCAFG00000001829 I 0.913
SRF Choloepus hoffmanni ENSCHOG00000008671 I 0.913
srf Ciona intestinalis ENSCING00000018042 I 0.826
SRF Bos taurus ENSBTAG00000012777 I 0.913
SRF Equus caballus ENSECAG00000009068 I 0.913
SRF Tursiops truncatus ENSTTRG00000007017 I 0.913
SRF Anolis carolinensis ENSACAG00000004798 I 0.913
srf Xenopus tropicalis XB-GENE-482036 I 0.913
SRF Tetraodon nigroviridis ENSTNIG00000013420 I 0.913
SRF Monodelphis domestica ENSMODG00000018981 I 0.913
SRF Callithrix jacchus ENSCJAG00000005223 I 0.913
SRF Takifugu rubripes ENSTRUG00000017531 I 0.913
SRF Procavia capensis ENSPCAG00000009376 I 0.783
SRF Oryzias latipes ENSORLG00000013036 I 0.913
SRF Otolemur garnettii ENSOGAG00000029623 I 0.913
SRF Oryctolagus cuniculus ENSOCUG00000002892 I 0.913
SRF Pan troglodytes ENSPTRG00000018189 I 0.913
SRF Pteropus vampyrus ENSPVAG00000008728 I 0.913
Srf Rattus norvegicus ENSRNOG00000018232 I 0.913
Srf Mus musculus ENSMUSG00000015605 D 0.913
SRF Macaca mulatta ENSMMUG00000000033 I 0.913
SRF Sus scrofa ENSSSCG00000001661 I 0.913
SRF Gasterosteus aculeatus ENSGACG00000003778 I 0.913
SRF Dasypus novemcinctus ENSDNOG00000014133 I 0.913
SRF Homo sapiens ENSG00000112658 D 0.913
SRF Felis catus ENSFCAG00000025180 I 0.913
srf.L Xenopus laevis XB-GENE-864819 I 0.913
srfa Danio rerio ENSDARG00000053918 I 0.913
srfa Tetraodon nigroviridis ENSTNIG00000002923 I 0.913
srfa Gasterosteus aculeatus ENSGACG00000020002 I 0.913
srfa Takifugu rubripes ENSTRUG00000011448 I 0.913
srfb Danio rerio ENSDARG00000102867 I 0.913
SSTP_0000932200 Strongyloides stercoralis SSTP_0000932200 I 0.913
SVE_1017000 Strongyloides venezuelensis SVE_1017000 I 0.913
TC004911 Tribolium castaneum TC004911 I 0.913
TCLT_0000849901 Thelazia callipaeda TCLT_0000849901 I 0.913
tetur02g05030 Tetranychus urticae tetur02g05030 I 0.783
TMUE_s0092001100 Trichuris muris TMUE_s0092001100 I 0.913
TTRE_0000468501 Trichuris trichiura TTRE_0000468501 I 0.913
unc-120 Caenorhabditis elegans WBGene00006844 D 0.913
WBGene00243571 Onchocerca volvulus WBGene00243571 I 0.913
WUBG_06152 Wuchereria bancrofti WUBG_06152 I 0.913
XP_002156545.1 Hydra magnipapillata XP_002156545.1 I 0.870
XP_002164692.1 Hydra magnipapillata XP_002164692.1 I 0.870
YQE_03076 Dendroctonus ponderosae YQE_03076 I 0.913