ENSPSIG00000010381 (Pelodiscus sinensis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 ENSPSIG00000010381 T253801_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MEF2D
M03343_2.00
Homo sapiens
DCTAWAAATAGM

KCTATTTWTAGH
SELEX
Jolma et al.(2013)
MEF2D_1
1.000 1.000
MEF2D
M05555_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2D_eDBD_HT-SELEX
1.000 1.000
MEF2D
M09250_2.00
Homo sapiens
CTAWAAATAGMH

DKCTATTTWTAG
Misc
Kulakovskiy et al.(2013)
MEF2D_HUMAN.H11MO.0.A
1.000 1.000
Mef2d
M09252_2.00
Mus musculus
DDCTAWAAATAGMH

DKCTATTTWTAGHH
Misc
Kulakovskiy et al.(2013)
MEF2D_MOUSE.H11MO.0.A
1.000 1.000
MEF2D
M10957_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2D_Q4
1.000 1.000
MEF2D
M05556_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2D_eDBD_Methyl-HT-SELEX
1.000 1.000
MEF2A
M03340_2.00
Homo sapiens
KCTAWAAATAGM

KCTATTTWTAGM
SELEX
Jolma et al.(2013)
MEF2A_1
0.958 0.958
MEF2A
M07979_2.00
Homo sapiens
NDDHYAAAAATARHH

DDYTATTTTTRDHHN
ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2A_HudsonAlpha
0.958 0.958
MEF2A
M08212_2.00
Homo sapiens
CTAWWWWTAG

CTAWWWWTAG
ChIP-seq
Contrino et al.(2012)
Mv88
0.958 0.958
MEF2A
M08213_2.00
Homo sapiens
AAAATAGM

KCTATTTT
ChIP-seq
Contrino et al.(2012)
Mv90
0.958 0.958
MEF2A
M09247_2.00
Homo sapiens
DYYAAAAATAGMH

DKCTATTTTTRRH
Misc
Kulakovskiy et al.(2013)
MEF2A_HUMAN.H11MO.0.A
0.958 0.958
Mef2a
M09255_2.00
Mus musculus
DDCYAWAAATARMH

DKYTATTTWTRGHH
Misc
Kulakovskiy et al.(2013)
MEF2A_MOUSE.H11MO.0.A
0.958 0.958
Mef2a
M09599_2.00
Mus musculus
CYNDAAATAG

CTATTTHNRG
Misc
Heinz et al.(2010)
HL1-Mef2a.biotin_GSE21529
0.958 0.958
MEF2A
M10933_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AMEF2_Q6
0.958 0.958
MEF2A
M10934_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMEF2_Q6
0.958 0.958
MEF2A
M10935_2.00
Homo sapiens
BTCTAAAAATAACYCY

RGRGTTATTTTTAGAV
Transfac
Matys et al.(2006)
V$MEF2_01
0.958 0.958
MEF2A
M10936_2.00
Homo sapiens
BNNNDDDCTAWAAATAGMHNNN

NNNDKCTATTTWTAGHHHNNNV
Transfac
Matys et al.(2006)
V$MEF2_02
0.958 0.958
MEF2A
M10937_2.00
Homo sapiens
NNNNDWKCTAWAAATAGMHHNN

NNDDKCTATTTWTAGMWHNNNN
Transfac
Matys et al.(2006)
V$MEF2_03
0.958 0.958
MEF2A
M10938_2.00
Homo sapiens
NVTGTTRCTAWAAATAGAAHHN

NDDWTCTATTTWTAGYAACABN
Transfac
Matys et al.(2006)
V$MEF2_04
0.958 0.958
MEF2A
M10939_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2A_05
0.958 0.958
MEF2A
M10940_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2A_Q6
0.958 0.958
MEF2A
M10941_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2_Q6_02
0.958 0.958
MEF2A
M10942_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MMEF2_Q6
0.958 0.958
MEF2A
M10943_2.00
Homo sapiens
NDKCTAWAAATAGMHH

DDKCTATTTWTAGMHN
Transfac
Matys et al.(2006)
V$RSRFC4_01
0.958 0.958
MEF2A
M10944_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RSRFC4_Q2
0.958 0.958
MEF2C
M02745_2.00
Homo sapiens
TWCTAWAAATAG

CTATTTWTAGWA
SELEX
Jolma et al.(2010)
MEF2C_dimer
0.938 0.938
MEF2C
M05551_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2C_FL_HT-SELEX
0.938 0.938
MEF2C
M08149_2.00
Homo sapiens
NDDMYAAAAATAGMH

DKCTATTTTTRKHHN
ChIP-seq
Mathelier et al.(2014)
MA0497.1
0.938 0.938
MEF2C
M07980_2.00
Homo sapiens
NDDYYAAAAATAGHH

DDCTATTTTTRRHHN
ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2C_HudsonAlpha
0.938 0.938
MEF2C
M09248_2.00
Homo sapiens
DYYAAAAATARMH

DKYTATTTTTRRH
Misc
Kulakovskiy et al.(2013)
MEF2C_HUMAN.H11MO.0.A
0.938 0.938
Mef2c
M09253_2.00
Mus musculus
DDMYAAAAATAGMHN

NDKCTATTTTTRKHH
Misc
Kulakovskiy et al.(2013)
MEF2C_MOUSE.H11MO.0.A
0.938 0.938
MEF2C
M09597_2.00
Homo sapiens
DHYWDAAATARM

KYTATTTHWRDH
Misc
Heinz et al.(2010)
GM12878-Mef2c_GSE32465
0.938 0.938
MEF2C
M10945_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2C_02
0.938 0.938
MEF2C
M10946_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2C_Q4
0.938 0.938
MEF2C
M05552_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2C_FL_Methyl-HT-SELEX
0.938 0.938
MEF2B
M03344_2.00
Homo sapiens
RCTAWAAATAGM

KCTATTTWTAGY
SELEX
Jolma et al.(2013)
MEF2B_1
0.896 0.896
MEF2B
M05557_2.00
Homo sapiens
CYNDWWWHGG

CCDWWWHNRG
SELEX
Yin et al.(2017)
MEF2B_eDBD_HT-SELEX
0.896 0.896
MEF2B
M05559_2.00
Homo sapiens
CCVDWTATGGTAACA

TGTTACCATAWHBGG
SELEX
Yin et al.(2017)
MEF2B_FL_HT-SELEX
0.896 0.896
Mef2
M08214_2.00
Drosophila melanogaster
YTAWWWWTAR

YTAWWWWTAR
ChIP-seq
Contrino et al.(2012)
Mf26
0.896 0.896
MEF2B
M09251_2.00
Homo sapiens
CYWAAAATAGHHHH

DDDDCTATTTTWRG
Misc
Kulakovskiy et al.(2013)
MEF2B_HUMAN.H11MO.0.A
0.896 0.896
MEF2B
M05558_2.00
Homo sapiens
CYWWWWWNGG

CCNWWWWWRG
SELEX
Yin et al.(2017)
MEF2B_eDBD_Methyl-HT-SELEX
0.896 0.896
MEF2B
M05560_2.00
Homo sapiens
CCVDATATGGTAACR

YGTTACCATATHBGG
SELEX
Yin et al.(2017)
MEF2B_FL_Methyl-HT-SELEX
0.896 0.896
Mef2b
M10958_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2B_02
0.854 0.854
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000011479 MADS box 10 57

Links

Other MADS box family TFs
Other Pelodiscus sinensis TFs

488 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
dmd-3 Caenorhabditis elegans WBGene00012832 D 0.000
L892_g27879 Steinernema scapterisci L892_g27879 I 0.000
Bm6550 Brugia malayi Bm6550 N 0.000
SMUV_0001103601 Syphacia muris SMUV_0001103601 N 0.000
NBR_0000071001 Nippostrongylus brasiliensis NBR_0000071001 N 0.000
L889_g14208 Steinernema feltiae L889_g14208 N 0.000
HPLM_0001382501 Haemonchus placei HPLM_0001382501 N 0.000
Hba_18486 Heterorhabditis bacteriophora Hba_18486 N 0.000
EVEC_0001283901 Enterobius vermicularis EVEC_0001283901 N 0.000
EEL_0000847601 Elaeophora elaphi EEL_0000847601 N 0.000
DME_0000028701 Dracunculus medinensis DME_0000028701 N 0.000
ASU_15182 Ascaris suum ASU_15182 N 0.000
ANCCEY_01474 Ancylostoma ceylanicum ANCCEY_01474 N 0.000
ALUE_0001885601 Ascaris lumbricoides ALUE_0001885601 N 0.000
WBGene00242840 Onchocerca volvulus WBGene00242840 N 0.000
LOAG_13296 Loa loa LOAG_13296 N 0.000
TCLT_0000242201 Thelazia callipaeda TCLT_0000242201 N 0.000