CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
F775_04223
(
Aegilops tauschii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
F775_04223
T253902_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MAD55_ORYSJ
M10962_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS55_01
0.708
0.708
Q4U0F1_WHEAT
M10978_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT2_01
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMT32481
MADS box
20
67
KIESEEARQVCFSKRRAGLFKKASELAVLCGAEVAAVVFSPAGKAFSF
Links
Other
MADS box
family TFs
Other
Aegilops tauschii
TFs
141 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRAES3BF106100060CFD_g
Triticum aestivum
TRAES3BF106100060CFD_g
I
1.000
F775_43210
Aegilops tauschii
F775_43210
I
0.958
Traes_6DL_609A01BD5
Triticum aestivum
Traes_6DL_609A01BD5
I
0.958
GRMZM5G891280
Zea mays
GRMZM5G891280
I
0.896
Si019951m.g
Setaria italica
Si019951m.g
I
0.896
Sb09g029120
Sorghum bicolor
Sb09g029120
I
0.896
AC234185.1_FG006
Zea mays
AC234185.1_FG006
I
0.896
Pavir.J00788
Panicum virgatum
Pavir.J00788
I
0.896
Pavir.J11717
Panicum virgatum
Pavir.J11717
I
0.896
OPUNC09G00580
Oryza punctata
OPUNC09G00580
N
0.875
OGLUM01G50090
Oryza glumaepatula
OGLUM01G50090
N
0.854
OLONG_018222
Oryza longistaminata
OLONG_018222
N
0.854
OGLUM09G01140
Oryza glumaepatula
OGLUM09G01140
N
0.854
GSMUA_Achr5G26530_001
Musa acuminata
GSMUA_Achr5G26530_001
I
0.854
OBART01G45740
Oryza barthii
OBART01G45740
N
0.854
OBART09G00850
Oryza barthii
OBART09G00850
N
0.854
OLONG_027660
Oryza longistaminata
OLONG_027660
N
0.854
GSMUA_Achr8G07230_001
Musa acuminata
GSMUA_Achr8G07230_001
I
0.854
ONIVA01G52000
Oryza nivara
ONIVA01G52000
N
0.854
ORUFI09G00870
Oryza rufipogon
ORUFI09G00870
N
0.854
OS01G0975800
Oryza sativa
OS01G0975800
N
0.854
OS09G0116800
Oryza sativa
OS09G0116800
N
0.854
ORUFI01G49230
Oryza rufipogon
ORUFI01G49230
N
0.854
ORGLA09G0007400
Oryza glaberrima
ORGLA09G0007400
N
0.854
Aquca_041_00050
Aquilegia coerulea
Aquca_041_00050
N
0.854
ONIVA09G00960
Oryza nivara
ONIVA09G00960
N
0.854
OPUNC01G44670
Oryza punctata
OPUNC01G44670
N
0.854
OMERI09G00900
Oryza meridionalis
OMERI09G00900
N
0.854
ORGLA01G0394900
Oryza glaberrima
ORGLA01G0394900
N
0.854
BGIOSGA030217
Oryza indica
BGIOSGA030217
N
0.854
BGIOSGA005284
Oryza indica
BGIOSGA005284
N
0.854
LPERR01G40130
Leersia perrieri
LPERR01G40130
N
0.833
Pavir.Fb00782
Panicum virgatum
Pavir.Fb00782
I
0.828
BRADI4G39420
Brachypodium distachyon
BRADI4G39420
N
0.812
OB01G55160
Oryza brachyantha
OB01G55160
N
0.812
LPERR02G10390
Leersia perrieri
LPERR02G10390
N
0.812
Pavir.Bb00804
Panicum virgatum
Pavir.Bb00804
N
0.792
Pavir.Ba03370
Panicum virgatum
Pavir.Ba03370
N
0.792
Si038960m.g
Setaria italica
Si038960m.g
N
0.771
Aquca_054_00126
Aquilegia coerulea
Aquca_054_00126
N
0.771
AMTR_s00025p00244880
Amborella trichopoda
AMTR_s00025p00244880
N
0.771
evm.TU.supercontig_20.86
Carica papaya
evm.TU.supercontig_20.86
N
0.771
Bra026764
Brassica rapa
Bra026764
N
0.771
GRMZM2G459864
Zea mays
GRMZM2G459864
N
0.771
MLOC_55767
Hordeum vulgare
MLOC_55767
N
0.750
SELMODRAFT_450772
Selaginella moellendorffii
SELMODRAFT_450772
N
0.750
Thhalv10003338m.g
Eutrema salsugineum
Thhalv10003338m.g
N
0.750
Sb07g007306
Sorghum bicolor
Sb07g007306
N
0.750
BRADI2G26320
Brachypodium distachyon
BRADI2G26320
N
0.750
gw1.88.220.1
Physcomitrella patens
gw1.88.220.1
N
0.750
F775_23176
Aegilops tauschii
F775_23176
N
0.750
Thhalv10000479m.g
Eutrema salsugineum
Thhalv10000479m.g
N
0.750
SELMODRAFT_450777
Selaginella moellendorffii
SELMODRAFT_450777
N
0.750
gw1.81.151.1
Physcomitrella patens
gw1.81.151.1
N
0.750
Bostr.8705s0016
Boechera stricta
Bostr.8705s0016
N
0.750
Pavir.Bb00803
Panicum virgatum
Pavir.Bb00803
N
0.750
SELMODRAFT_450776
Selaginella moellendorffii
SELMODRAFT_450776
N
0.750
SELMODRAFT_450775
Selaginella moellendorffii
SELMODRAFT_450775
N
0.750
F775_23542
Aegilops tauschii
F775_23542
N
0.750
Sb07g007373
Sorghum bicolor
Sb07g007373
N
0.750
F775_21960
Aegilops tauschii
F775_21960
N
0.733
Traes_7DS_366A869CF
Triticum aestivum
Traes_7DS_366A869CF
I
0.732
GRMZM2G472100
Zea mays
GRMZM2G472100
N
0.729
BGIOSGA022830
Oryza indica
BGIOSGA022830
N
0.729
ORUFI02G05030
Oryza rufipogon
ORUFI02G05030
N
0.729
ORUFI06G14240
Oryza rufipogon
ORUFI06G14240
N
0.729
Sb0836s002010
Sorghum bicolor
Sb0836s002010
N
0.729
BGIOSGA007600
Oryza indica
BGIOSGA007600
N
0.729
Si032189m.g
Setaria italica
Si032189m.g
N
0.729
scaffold_400572.1
Arabidopsis lyrata
scaffold_400572.1
N
0.729
OB06G21580
Oryza brachyantha
OB06G21580
N
0.729
29613.m000367
Ricinus communis
29613.m000367
N
0.729
Sb06g015640
Sorghum bicolor
Sb06g015640
N
0.729
Sb02g006700
Sorghum bicolor
Sb02g006700
N
0.729
ORGLA02G0045500
Oryza glaberrima
ORGLA02G0045500
N
0.729
BRADI3G18670
Brachypodium distachyon
BRADI3G18670
N
0.729
ONIVA02G05120
Oryza nivara
ONIVA02G05120
N
0.729
ONIVA06G15960
Oryza nivara
ONIVA06G15960
N
0.729
Cagra.1004s0007
Capsella grandiflora
Cagra.1004s0007
N
0.729
Carubv10024914m.g
Capsella rubella
Carubv10024914m.g
N
0.729
OLONG_015132
Oryza longistaminata
OLONG_015132
N
0.729
AGL61
Arabidopsis lyrata
Al_scaffold_0004_541
N
0.729
SapurV1A.0019s0700
Salix purpurea
SapurV1A.0019s0700
N
0.729
F775_52426
Aegilops tauschii
F775_52426
N
0.729
OGLUM02G04740
Oryza glumaepatula
OGLUM02G04740
N
0.729
Aquca_015_00242
Aquilegia coerulea
Aquca_015_00242
N
0.729
BRADI1G20090
Brachypodium distachyon
BRADI1G20090
N
0.729
Aquca_015_00243
Aquilegia coerulea
Aquca_015_00243
N
0.729
ORGLA06G0273400
Oryza glaberrima
ORGLA06G0273400
N
0.729
GSMUA_Achr8G09250_001
Musa acuminata
GSMUA_Achr8G09250_001
I
0.729
OPUNC09G08220
Oryza punctata
OPUNC09G08220
N
0.729
AGL61
Arabidopsis thaliana
AT2G24840
N
0.729
OPUNC06G12720
Oryza punctata
OPUNC06G12720
N
0.729
OBART02G04930
Oryza barthii
OBART02G04930
N
0.724
TRIUR3_21732
Triticum urartu
TRIUR3_21732
I
0.721
LjSGA_079719.1
Lotus japonicus
LjSGA_079719.1
N
0.708
Ca_04665
Cicer arietinum
Ca_04665
N
0.708
Ca_26354
Cicer arietinum
Ca_26354
N
0.708
Ca_07607
Cicer arietinum
Ca_07607
N
0.708
VIT_03s0088g00590
Vitis vinifera
VIT_03s0088g00590
N
0.708
mgf024307m
Mimulus guttatus
mgf024307m
N
0.708
Aquca_040_00096
Aquilegia coerulea
Aquca_040_00096
N
0.708
TRIUR3_22433
Triticum urartu
TRIUR3_22433
N
0.708
mgf018529m
Mimulus guttatus
mgf018529m
N
0.708
chr5.LjT39E05.40.nd
Lotus japonicus
chr5.LjT39E05.40.nd
N
0.708
30099.m001671
Ricinus communis
30099.m001671
N
0.708
Cucsa.047600
Cucumis sativus
Cucsa.047600
N
0.708
Cla009921
Citrullus lanatus
Cla009921
N
0.708
POPTR_0009s08740
Populus trichocarpa
POPTR_0009s08740
N
0.708
OGLUM06G14250
Oryza glumaepatula
OGLUM06G14250
N
0.708
OBART09G00790
Oryza barthii
OBART09G00790
N
0.708
OBART06G13310
Oryza barthii
OBART06G13310
N
0.708
OMERI02G05750
Oryza meridionalis
OMERI02G05750
N
0.708
OMERI06G08590
Oryza meridionalis
OMERI06G08590
I
0.708
BRADI1G45807
Brachypodium distachyon
BRADI1G45807
I
0.708
ONIVA09G00820
Oryza nivara
ONIVA09G00820
N
0.708
GLYMA10G40060
Glycine max
GLYMA10G40060
N
0.708
OB08G28340
Oryza brachyantha
OB08G28340
I
0.708
GLYMA20G27341
Glycine max
GLYMA20G27341
N
0.708
GLYMA20G27350
Glycine max
GLYMA20G27350
N
0.708
MAD55_ORYSJ
Oryza sativa
MAD55_ORYSJ
D
0.708
MTR_2g030740
Medicago truncatula
MTR_2g030740
N
0.708
OB06G16920
Oryza brachyantha
OB06G16920
I
0.708
MTR_3g080940
Medicago truncatula
MTR_3g080940
N
0.708
OPUNC02G04080
Oryza punctata
OPUNC02G04080
N
0.708
OPUNC06G07080
Oryza punctata
OPUNC06G07080
I
0.708
Q4U0F1_WHEAT
Triticum aestivum
Q4U0F1_WHEAT
D
0.708
POPTR_0004s13590
Populus trichocarpa
POPTR_0004s13590
N
0.708
Sb02g006710
Sorghum bicolor
Sb02g006710
N
0.708
BGIOSGA021662
Oryza indica
BGIOSGA021662
I
0.708
AGL62
Arabidopsis thaliana
AT5G60440
I
0.708
TRAES3BF009000010CFD_g
Triticum aestivum
TRAES3BF009000010CFD_g
I
0.708
TRIUR3_03219
Triticum urartu
TRIUR3_03219
I
0.708
OS09G0116000
Oryza sativa
OS09G0116000
N
0.708
ORGLA06G0069900
Oryza glaberrima
ORGLA06G0069900
I
0.708
Bra007829
Brassica rapa
Bra007829
N
0.708
OS06G0217300
Oryza sativa
OS06G0217300
I
0.708
Bo8g099550
Brassica oleracea
Bo8g099550
N
0.708
Bo4g157220
Brassica oleracea
Bo4g157220
N
0.708
BGIOSGA030219
Oryza indica
BGIOSGA030219
N
0.708
Traes_7DL_A773A64E2
Triticum aestivum
Traes_7DL_A773A64E2
N
0.707