F775_11207 (Aegilops tauschii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 F775_11207 T253911_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL16
M06987_2.00 		Arabidopsis thaliana
TWCCHAAWDDGGWAA
TTWCCHHWTTDGGWA		 Dap-seq
OMalley et al.(2016)
AGL16_col_a 		0.708 0.708
AGL16
M06988_2.00 		Arabidopsis thaliana
WDWNTTWCCHWAWWDGGAAAS
STTTCCHWWTWDGGWAANWHW		 Dap-seq
OMalley et al.(2016)
AGL16_colamp_a 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMT12307 MADS box 10 57

Links

Other MADS box family TFs
Other Aegilops tauschii TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0001s29100 Populus trichocarpa POPTR_0001s29100 I 0.771
ORGLA06G0125600 Oryza glaberrima ORGLA06G0125600 I 0.750
ORUFI06G14980 Oryza rufipogon ORUFI06G14980 I 0.750
GSMUA_Achr7G12610_001 Musa acuminata GSMUA_Achr7G12610_001 I 0.750
OS06G0347700 Oryza sativa OS06G0347700 I 0.750
OPUNC06G13170 Oryza punctata OPUNC06G13170 I 0.750
OBART06G14060 Oryza barthii OBART06G14060 I 0.750
OLONG_018231 Oryza longistaminata OLONG_018231 I 0.750
ONIVA06G16870 Oryza nivara ONIVA06G16870 I 0.750
OGLUM06G15040 Oryza glumaepatula OGLUM06G15040 I 0.750
ANR1 Vitis vinifera VIT_18s0001g07900 I 0.750
cassava4651.m1 Manihot esculenta cassava4651.m1 I 0.750
OMERI06G15180 Oryza meridionalis OMERI06G15180 I 0.750
BGIOSGA022872 Oryza indica BGIOSGA022872 I 0.750
Thhalv10022995m.g Eutrema salsugineum Thhalv10022995m.g I 0.750
BRADI1G32210 Brachypodium distachyon BRADI1G32210 I 0.750
29596.m000699 Ricinus communis 29596.m000699 I 0.729
cassava26340.m1 Manihot esculenta cassava26340.m1 I 0.729
Carubv10015972m.g Capsella rubella Carubv10015972m.g I 0.729
PGSC0003DMG400009349 Solanum tuberosum PGSC0003DMG400009349 I 0.729
Pm004349 Prunus mume Pm004349 I 0.729
ANR1 Arabidopsis thaliana AT2G14210 I 0.729
TCM_034549 Theobroma cacao TCM_034549 I 0.729
Solyc12g088080.1 Solanum lycopersicum Solyc12g088080.1 I 0.729
Solyc04g076680.2 Solanum lycopersicum Solyc04g076680.2 I 0.729
Bostr.13083s0004 Boechera stricta Bostr.13083s0004 I 0.729
POPTR_0005s19440 Populus trichocarpa POPTR_0005s19440 I 0.729
Cagra.3821s0004 Capsella grandiflora Cagra.3821s0004 I 0.729
cassava39185.m1 Manihot esculenta cassava39185.m1 I 0.729
Gorai.009G227500 Gossypium raimondii Gorai.009G227500 I 0.729
MDP0000234911 Malus domestica MDP0000234911 I 0.729
GLYMA02G38091 Glycine max GLYMA02G38091 I 0.729
Lus10042918.g Linum usitatissimum Lus10042918.g I 0.729
GLYMA13G32810 Glycine max GLYMA13G32810 I 0.729
Bra017638 Brassica rapa Bra017638 I 0.729
MDP0000475549 Malus domestica MDP0000475549 I 0.729
Thhalv10026116m.g Eutrema salsugineum Thhalv10026116m.g I 0.729
SapurV1A.0019s1110 Salix purpurea SapurV1A.0019s1110 I 0.729
Bo7g116760 Brassica oleracea Bo7g116760 I 0.729
GLYMA14G36221 Glycine max GLYMA14G36221 I 0.729
GLYMA15G06470 Glycine max GLYMA15G06470 I 0.729
OB06G22200 Oryza brachyantha OB06G22200 I 0.729
Gorai.010G032700 Gossypium raimondii Gorai.010G032700 I 0.729
evm.TU.supercontig_177.14 Carica papaya evm.TU.supercontig_177.14 I 0.729
Lus10028214.g Linum usitatissimum Lus10028214.g I 0.729
MTR_2g009890 Medicago truncatula MTR_2g009890 I 0.729
GSMUA_Achr10G30040_001 Musa acuminata GSMUA_Achr10G30040_001 I 0.729
GSMUA_Achr5G24560_001 Musa acuminata GSMUA_Achr5G24560_001 I 0.729
LPERR06G20000 Leersia perrieri LPERR06G20000 I 0.729
Eucgr.F02161 Eucalyptus grandis Eucgr.F02161 I 0.729
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.724
PK27158.1 Cannabis sativa PK27158.1 I 0.714
OB11G21480 Oryza brachyantha OB11G21480 I 0.714
GLYMA08G07001 Glycine max GLYMA08G07001 I 0.708
MDP0000228942 Malus domestica MDP0000228942 I 0.708
F775_15097 Aegilops tauschii F775_15097 I 0.708
MTR_5g066960 Medicago truncatula MTR_5g066960 I 0.708
OBART08G15610 Oryza barthii OBART08G15610 I 0.708
gene26429-v1.0-hybrid Fragaria vesca gene26429-v1.0-hybrid I 0.708
Gorai.008G018100 Gossypium raimondii Gorai.008G018100 I 0.708
Bra011509 Brassica rapa Bra011509 I 0.708
SapurV1A.0004s0740 Salix purpurea SapurV1A.0004s0740 I 0.708
AGL16 Arabidopsis thaliana AT3G57230 D 0.708
chr6.CM0055.180.nc Lotus japonicus chr6.CM0055.180.nc I 0.708
LjSGA_021013.1 Lotus japonicus LjSGA_021013.1 I 0.708
BGIOSGA026939 Oryza indica BGIOSGA026939 I 0.708
SapurV1A.2345s0030 Salix purpurea SapurV1A.2345s0030 I 0.708
gene25618-v1.0-hybrid Fragaria vesca gene25618-v1.0-hybrid I 0.708
Bo1g007520 Brassica oleracea Bo1g007520 I 0.708
SapurV1A.1370s0060 Salix purpurea SapurV1A.1370s0060 I 0.708
Pavir.Fb01587 Panicum virgatum Pavir.Fb01587 I 0.708
OGLUM08G16360 Oryza glumaepatula OGLUM08G16360 I 0.708
Traes_5DS_82FA431DB Triticum aestivum Traes_5DS_82FA431DB I 0.708
cassava33801.m1 Manihot esculenta cassava33801.m1 I 0.708
Sb07g021110 Sorghum bicolor Sb07g021110 I 0.708
PRUPE_ppa024736mg Prunus persica PRUPE_ppa024736mg I 0.708
29804.m001536 Ricinus communis 29804.m001536 I 0.708
Traes_7AS_EFE436F1D Triticum aestivum Traes_7AS_EFE436F1D I 0.708
Cla023427 Citrullus lanatus Cla023427 I 0.708
VIT_03s0097g00160 Vitis vinifera VIT_03s0097g00160 I 0.708
Pm021962 Prunus mume Pm021962 I 0.708
Cucsa.331900 Cucumis sativus Cucsa.331900 I 0.708
mgf021543m Mimulus guttatus mgf021543m I 0.708
ONIVA08G16700 Oryza nivara ONIVA08G16700 I 0.708
Carubv10017951m.g Capsella rubella Carubv10017951m.g I 0.708
OLONG_011763 Oryza longistaminata OLONG_011763 I 0.708
Ca_14956 Cicer arietinum Ca_14956 I 0.708
OPUNC08G13690 Oryza punctata OPUNC08G13690 I 0.708
Cagra.0578s0054 Capsella grandiflora Cagra.0578s0054 I 0.708
Aquca_010_00060 Aquilegia coerulea Aquca_010_00060 I 0.708
ORGLA08G0137000 Oryza glaberrima ORGLA08G0137000 I 0.708
Bostr.20505s0022 Boechera stricta Bostr.20505s0022 I 0.708
gene22696-v1.0-hybrid Fragaria vesca gene22696-v1.0-hybrid I 0.702