F775_30609 (Aegilops tauschii)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 F775_30609 T253957_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MADS16
M10971_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS16_01 		1.000 1.000
Q40513_TOBAC
M11001_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DEF_01 		0.793 0.793
SVP
M06984_2.00 		Arabidopsis thaliana
DDCCVAAWANGGHAA
TTDCCNTWTTBGGHH		 Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b 		0.724 0.724
SVP
M06985_2.00 		Arabidopsis thaliana
CCMAAWANGGWAANW
WNTTWCCNTWTTKGG		 Dap-seq
OMalley et al.(2016)
SVP_col_v3b 		0.724 0.724
AP3
M08146_2.00 		Arabidopsis thaliana
WDCCMAAARWRGHAA
TTDCYWYTTTKGGHW		 ChIP-seq
Mathelier et al.(2014)
MA0556.1 		0.724 0.724
SVP
M08424_2.00 		Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH
DDYTTTCCHTTTTKGGDWWN		 ChIP-chip
Mathelier et al.(2014)
MA0555.1 		0.724 0.724
AP3
M10919_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADSB_Q2 		0.724 0.724
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMT31604 MADS box 1 29

Links

Other MADS box family TFs
Other Aegilops tauschii TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI06G29170 Oryza rufipogon ORUFI06G29170 I 1.000
ORGLA06G0229200 Oryza glaberrima ORGLA06G0229200 I 1.000
MADS16 Oryza sativa OS06G0712700 D 1.000
Sb10g029810 Sorghum bicolor Sb10g029810 I 1.000
LPERR06G22780 Leersia perrieri LPERR06G22780 I 1.000
Traes_7AL_1C76E543C Triticum aestivum Traes_7AL_1C76E543C I 1.000
ONIVA06G29820 Oryza nivara ONIVA06G29820 I 1.000
OMERI06G27290 Oryza meridionalis OMERI06G27290 I 1.000
OB06G35020 Oryza brachyantha OB06G35020 I 1.000
MLOC_31575 Hordeum vulgare MLOC_31575 I 1.000
OBART06G27230 Oryza barthii OBART06G27230 I 1.000
GRMZM2G139073 Zea mays GRMZM2G139073 I 1.000
OLONG_004226 Oryza longistaminata OLONG_004226 I 1.000
OGLUM06G28660 Oryza glumaepatula OGLUM06G28660 I 1.000
TRIUR3_29719 Triticum urartu TRIUR3_29719 I 1.000
Traes_7DL_DDCC09B24 Triticum aestivum Traes_7DL_DDCC09B24 I 1.000
BGIOSGA020546 Oryza indica BGIOSGA020546 I 1.000
Pavir.Db00185 Panicum virgatum Pavir.Db00185 I 1.000
Pavir.J11672 Panicum virgatum Pavir.J11672 I 1.000
Si007221m.g Setaria italica Si007221m.g I 0.966
BRADI1G35000 Brachypodium distachyon BRADI1G35000 I 0.966
Lus10033187.g Linum usitatissimum Lus10033187.g I 0.828
OPUNC06G24880 Oryza punctata OPUNC06G24880 I 0.828
Q40513_TOBAC Nicotiana tabacum Q40513_TOBAC D 0.793
Cla021117 Citrullus lanatus Cla021117 I 0.793
MTR_3g113030 Medicago truncatula MTR_3g113030 I 0.793
chr1.CM0195.210.nc Lotus japonicus chr1.CM0195.210.nc I 0.793
Cucsa.342790 Cucumis sativus Cucsa.342790 I 0.793
Aquca_007_00336 Aquilegia coerulea Aquca_007_00336 I 0.793
Ca_04909 Cicer arietinum Ca_04909 I 0.793
Gorai.009G271100 Gossypium raimondii Gorai.009G271100 I 0.793
Lus10010630.g Linum usitatissimum Lus10010630.g I 0.793
Lus10031960.g Linum usitatissimum Lus10031960.g I 0.793
Gorai.008G064900 Gossypium raimondii Gorai.008G064900 I 0.793
TCM_034148 Theobroma cacao TCM_034148 I 0.793
GSMUA_Achr9G20950_001 Musa acuminata GSMUA_Achr9G20950_001 I 0.793
GLYMA06G02990 Glycine max GLYMA06G02990 I 0.793
F775_21044 Aegilops tauschii F775_21044 I 0.793
GSMUA_Achr9G20940_001 Musa acuminata GSMUA_Achr9G20940_001 I 0.793
AP3 Vitis vinifera VIT_18s0001g13460 I 0.759
TRIUR3_33318 Triticum urartu TRIUR3_33318 I 0.759
Thhalv10010683m.g Eutrema salsugineum Thhalv10010683m.g I 0.759
Bra014822 Brassica rapa Bra014822 I 0.759
Traes_6AS_9AA76345D Triticum aestivum Traes_6AS_9AA76345D I 0.759
Bra007067 Brassica rapa Bra007067 I 0.759
Eucgr.F01615 Eucalyptus grandis Eucgr.F01615 I 0.759
cassava33649.m1 Manihot esculenta cassava33649.m1 I 0.759
cassava21176.m1 Manihot esculenta cassava21176.m1 I 0.759
Solyc04g081000.2 Solanum lycopersicum Solyc04g081000.2 I 0.759
Bo8g083600 Brassica oleracea Bo8g083600 I 0.759
Bo4g120010 Brassica oleracea Bo4g120010 I 0.759
SapurV1A.0228s0130 Salix purpurea SapurV1A.0228s0130 I 0.759
PGSC0003DMG400003709 Solanum tuberosum PGSC0003DMG400003709 I 0.759
GLYMA03G26261 Glycine max GLYMA03G26261 I 0.759
GLYMA12G13560 Glycine max GLYMA12G13560 I 0.759
GLYMA16G17450 Glycine max GLYMA16G17450 I 0.759
POPTR_0006s04730 Populus trichocarpa POPTR_0006s04730 I 0.759
GLYMA04G02980 Glycine max GLYMA04G02980 I 0.759
Eucgr.G02427 Eucalyptus grandis Eucgr.G02427 I 0.724
Thhalv10000308m.g Eutrema salsugineum Thhalv10000308m.g I 0.724
SapurV1A.1777s0020 Salix purpurea SapurV1A.1777s0020 I 0.724
orange1.1g027470m.g Citrus sinensis orange1.1g027470m.g I 0.724
evm.TU.contig_33612 Carica papaya evm.TU.contig_33612 I 0.724
Ciclev10002410m.g Citrus clementina Ciclev10002410m.g I 0.724
Carubv10023941m.g Capsella rubella Carubv10023941m.g I 0.724
Bostr.20505s0007 Boechera stricta Bostr.20505s0007 I 0.724
Cagra.0562s0025 Capsella grandiflora Cagra.0562s0025 I 0.724
Cagra.1080s0011 Capsella grandiflora Cagra.1080s0011 I 0.724
Carubv10018833m.g Capsella rubella Carubv10018833m.g I 0.724
MDP0000144516 Malus domestica MDP0000144516 I 0.724
evm.TU.supercontig_6.199 Carica papaya evm.TU.supercontig_6.199 I 0.724
Lus10025719.g Linum usitatissimum Lus10025719.g I 0.724
Bo4g149800 Brassica oleracea Bo4g149800 I 0.724
Lus10035942.g Linum usitatissimum Lus10035942.g I 0.724
SVP Arabidopsis thaliana AT2G22540 D 0.724
Bo02907s010 Brassica oleracea Bo02907s010 I 0.724
AP3 Arabidopsis thaliana AT3G54340 D 0.724
MDP0000135652 Malus domestica MDP0000135652 I 0.724
AMTR_s00066p00109320 Amborella trichopoda AMTR_s00066p00109320 I 0.724
evm.TU.supercontig_6.202 Carica papaya evm.TU.supercontig_6.202 I 0.724
Bo8g091790 Brassica oleracea Bo8g091790 I 0.724
orange1.1g040046m.g Citrus sinensis orange1.1g040046m.g I 0.724
Bostr.19427s0024 Boechera stricta Bostr.19427s0024 I 0.724
cassava37821.valid.m1 Manihot esculenta cassava37821.valid.m1 I 0.724
SELMODRAFT_450837 Selaginella moellendorffii SELMODRAFT_450837 I 0.724
SELMODRAFT_450804 Selaginella moellendorffii SELMODRAFT_450804 I 0.724
SVP Arabidopsis lyrata fgenesh2_kg.4__174__AT2G22540.1 I 0.724
AMTR_s00001p00217560 Amborella trichopoda AMTR_s00001p00217560 I 0.724
Bra030228 Brassica rapa Bra030228 I 0.724
Bra038511 Brassica rapa Bra038511 I 0.724
AP3 Arabidopsis lyrata fgenesh2_kg.5__1825__AT3G54340.1 I 0.724
PRUPE_ppa019932mg Prunus persica PRUPE_ppa019932mg I 0.724
GSMUA_Achr3G06800_001 Musa acuminata GSMUA_Achr3G06800_001 I 0.724
GSMUA_Achr9G15180_001 Musa acuminata GSMUA_Achr9G15180_001 I 0.724
GLYMA18G36263 Glycine max GLYMA18G36263 N 0.724
GLYMA18G33910 Glycine max GLYMA18G33910 N 0.724
POPTR_0007s14300 Populus trichocarpa POPTR_0007s14300 I 0.724
GLYMA02G33040 Glycine max GLYMA02G33040 I 0.724
SVP Vitis vinifera VIT_00s0313g00070 I 0.724
VIT_04s0023g02820 Vitis vinifera VIT_04s0023g02820 I 0.724
Bra000392 Brassica rapa Bra000392 I 0.724
Cucsa.194800 Cucumis sativus Cucsa.194800 I 0.724
e_gw1.171.4.1 Physcomitrella patens e_gw1.171.4.1 I 0.724
e_gw1.209.37.1 Physcomitrella patens e_gw1.209.37.1 I 0.724
Bo8g101000 Brassica oleracea Bo8g101000 I 0.724
estExt_fgenesh1_kg.C_260002 Physcomitrella patens estExt_fgenesh1_kg.C_260002 I 0.724
cassava41235.m1 Manihot esculenta cassava41235.m1 I 0.724
cassava37822.valid.m1 Manihot esculenta cassava37822.valid.m1 I 0.724
Bra007324 Brassica rapa Bra007324 I 0.724
Cla006973 Citrullus lanatus Cla006973 I 0.724
Pm018087 Prunus mume Pm018087 I 0.724
29782.m000119 Ricinus communis 29782.m000119 I 0.724
cassava3099.m1 Manihot esculenta cassava3099.m1 I 0.724
Bostr.0697s0046 Boechera stricta Bostr.0697s0046 I 0.724