CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA03G19880
(
Glycine max
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
GLYMA03G19880
T254102_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA03G19880.1
MADS box
10
55
YISNPTKRKATFKKRKNGLLKKVSEISTLCATEACAIIYSPDEPAK
Links
Other
MADS box
family TFs
Other
Glycine max
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA02G34160
Glycine max
GLYMA02G34160
N
0.800
GLYMA11G26120
Glycine max
GLYMA11G26120
N
0.773
Pm004396
Prunus mume
Pm004396
I
0.756
PRUPE_ppa018168mg
Prunus persica
PRUPE_ppa018168mg
I
0.756
MDP0000925348
Malus domestica
MDP0000925348
I
0.733
GLYMA03G13570
Glycine max
GLYMA03G13570
N
0.733
evm.TU.contig_38146
Carica papaya
evm.TU.contig_38146
I
0.727
mgf026186m
Mimulus guttatus
mgf026186m
I
0.727
LjSGA_104570.1
Lotus japonicus
LjSGA_104570.1
I
0.724
30199.m000879
Ricinus communis
30199.m000879
I
0.723
TCM_026842
Theobroma cacao
TCM_026842
I
0.717
cassava15247.m1
Manihot esculenta
cassava15247.m1
I
0.711
GSMUA_Achr3G05500_001
Musa acuminata
GSMUA_Achr3G05500_001
I
0.711
GLYMA18G06040
Glycine max
GLYMA18G06040
N
0.705