GLYMA05G28130 (Glycine max)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GLYMA05G28130 T254115_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL6
M06986_2.00
Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW

WWNTTWCYWTTTTDGGWAA
Dap-seq
OMalley et al.(2016)
AGL6_col_a
0.787 0.787
MAD17_ORYSJ
M10961_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS17_01
0.787 0.787
MADS6
M10967_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS6_01
0.787 0.787
Solyc05g012020.2
M10986_2.00
Solanum lycopersicum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RIN_01
0.787 0.787
Solyc05g012020.2
M10987_2.00
Solanum lycopersicum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RIN_Q2_01
0.787 0.787
Solyc05g012020.2
M10988_2.00
Solanum lycopersicum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RIN_Q2
0.787 0.787
AGL3
M02693_2.00
Arabidopsis thaliana
VDWNCCAWWWWWRGNWNN

NNWNCYWWWWWTGGNWHB
SELEX
Mathelier et al.(2014)
MA0001.2
0.766 0.766
AGL3
M10908_2.00
Arabidopsis thaliana
VDWNCCAWWWWWRGNWNN

NNWNCYWWWWWTGGNWHB
Transfac
Matys et al.(2006)
P$AGL3_01
0.766 0.766
AGL3
M10909_2.00
Arabidopsis thaliana
NDTNCCAWWWWTRGHWNN

NNWDCYAWWWWTGGNAHN
Transfac
Matys et al.(2006)
P$AGL3_02
0.766 0.766
AGL3
M10910_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL3_03
0.766 0.766
Q9ATF1_PETHY
M11013_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP9_01
0.766 0.766
O82699_MALDO
M11022_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS11_01
0.766 0.766
Q9ST54_MALDO
M11029_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_04
0.766 0.766
O82697_MALDO
M11020_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS7_01
0.766 0.766
SEP1
M02696_2.00
Arabidopsis thaliana
NDWNCCAWWWWTRGHAWB

VWTDCYAWWWWTGGNWHN
SELEX
Mathelier et al.(2014)
MA0584.1
0.745 0.745
SEP3
M08143_2.00
Arabidopsis thaliana
CCAAAAAWRGN

NCYWTTTTTGG
ChIP-seq
Mathelier et al.(2014)
MA0563.1
0.745 0.745
SEP1
M10929_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL2_01
0.745 0.745
SEP1
M10930_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL2_02
0.745 0.745
SEP3
M10902_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL9_01
0.745 0.745
AGL9_PETHY
M10993_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP2_01
0.745 0.745
Q9ATE6_PETHY
M11009_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP23_01
0.745 0.745
Q9ATF3_PETHY
M11015_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP4_01
0.745 0.745
O82084_MALDO
M11018_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_01
0.745 0.745
Q6UGQ8_PETHY
M11005_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS12_01
0.745 0.745
MAD14_ORYSJ
M10960_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS14_01
0.745 0.745
Q9ZRA5_MALDO
M11030_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_04
0.745 0.745
Q9LM09_TOBAC
M11016_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS4_01
0.745 0.745
MADS7
M10975_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS7_02
0.745 0.745
MADS8
M10976_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS8_01
0.745 0.745
Q9SBA6_MALDO
M11028_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS8_02
0.745 0.745
squamosa
M02697_2.00
Antirrhinum majus
MYAWAWAWRGHAAN

NTTDCYWTWTWTRK
SELEX
Mathelier et al.(2014)
MA0082.1
0.723 0.723
Q9LEI3_HORVU
M10985_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM3_01
0.723 0.723
Q9LEH9_HORVU
M10983_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM9_01
0.723 0.723
MADS18
M10973_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS18_01
0.723 0.723
Q38742_ANTMA
M11000_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SQUA_01
0.723 0.723
Q84LI3_WHEAT
M10979_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT1_01
0.723 0.723
O82128_WHEAT
M10965_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WAP1_01
0.723 0.723
AGL13
M06989_2.00
Arabidopsis thaliana
WTWCYHAAAAWRGWAADW

WHTTWCYWTTTTDRGWAW
Dap-seq
OMalley et al.(2016)
AGL13_col_b
0.702 0.702
FLC
M06990_2.00
Arabidopsis thaliana
WWDMYNDWWWWGGAAASW

WSTTTCCWWWWHNRKHWW
Dap-seq
OMalley et al.(2016)
AGL25_col_a
0.702 0.702
FLC
M06991_2.00
Arabidopsis thaliana
WCYHAAAAWGGAAAS

STTTCCWTTTTDRGW
Dap-seq
OMalley et al.(2016)
AGL25_colamp_a
0.702 0.702
SVP
M06984_2.00
Arabidopsis thaliana
DDCCVAAWANGGHAA

TTDCCNTWTTBGGHH
Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b
0.702 0.702
SVP
M06985_2.00
Arabidopsis thaliana
CCMAAWANGGWAANW

WNTTWCCNTWTTKGG
Dap-seq
OMalley et al.(2016)
SVP_col_v3b
0.702 0.702
AGL1
M02694_2.00
Arabidopsis thaliana
NDTDCCWWWWNDGGWAHN

NDTWCCHNWWWWGGHAHN
SELEX
Mathelier et al.(2014)
MA0585.1
0.702 0.702
AG
M02695_2.00
Arabidopsis thaliana
HTTWCCWWAWNDGGHADN

NHTDCCHNWTWWGGWAAD
SELEX
Mathelier et al.(2014)
MA0005.2
0.702 0.702
AP1
M08144_2.00
Arabidopsis thaliana
MYAAAAAWRGAAA

TTTCYWTTTTTRK
ChIP-seq
Mathelier et al.(2014)
MA0940.1
0.702 0.702
FLC
M08147_2.00
Arabidopsis thaliana
NNWWDCYVAAAWWRGAAAVHH

DDBTTTCYWWTTTBRGHWWNN
ChIP-seq
Mathelier et al.(2014)
MA0558.1
0.702 0.702
SVP
M08424_2.00
Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH

DDYTTTCCHTTTTKGGDWWN
ChIP-chip
Mathelier et al.(2014)
MA0555.1
0.702 0.702
SOC1
M08425_2.00
Arabidopsis thaliana
CCAAAAAWRGAAAND

HNTTTCYWTTTTTGG
ChIP-chip
Mathelier et al.(2014)
MA0554.1
0.702 0.702
AG
M10923_2.00
Arabidopsis thaliana
HTTWCCWWAWNDGGHWDN

NHTDCCHNWTWWGGWAAD
Transfac
Matys et al.(2006)
P$AG_01
0.702 0.702
AG
M10924_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AG_02
0.702 0.702
AG
M10925_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AG_03
0.702 0.702
AG_TOBAC
M10995_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AG1_02
0.702 0.702
AGL1
M10920_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL1_01
0.702 0.702
AGL1
M10921_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL1_02
0.702 0.702
SOC1
M10915_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL20_01
0.702 0.702
SEP2
M10916_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL4_01
0.702 0.702
AG
M10926_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AG_Q2
0.702 0.702
MLOC_61901
M10964_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM8_01
0.702 0.702
Q9ATE8_PETHY
M11011_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP21_01
0.702 0.702
Q9ATE7_PETHY
M11010_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP22_01
0.702 0.702
FBP24_PETHY
M10997_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP24_01
0.702 0.702
Q9ATE3_PETHY
M11008_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP28_01
0.702 0.702
Q9ATF2_PETHY
M11014_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP5_01
0.702 0.702
Q08711_PETHY
M10999_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP6_01
0.702 0.702
O82698_MALDO
M11021_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS10_01
0.702 0.702
Q40591_TOBAC
M11002_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_03
0.702 0.702
MADS15
M10972_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS15_01
0.702 0.702
MADS3_ORYSJ
M10963_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_01
0.702 0.702
AG_PETHY
M10994_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_02
0.702 0.702
Q9FR84_MAIZE
M10981_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_03
0.702 0.702
MADS50
M10968_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS50_01
0.702 0.702
O82695_MALDO
M11019_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS5_01
0.702 0.702
AP1
M10905_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSA_Q2
0.702 0.702
SHP2
M10914_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SHP2_01
0.702 0.702
Q41829_MAIZE
M10977_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_02
0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA05G28130.1 MADS box 10 56
GLYMA05G28130.2 MADS box 10 56
GLYMA05G28130.3 MADS box 10 56
GLYMA05G28130.4 MADS box 10 56
GLYMA05G28130.5 MADS box 10 56
GLYMA05G28130.6 MADS box 10 56

Links

Other MADS box family TFs
Other Glycine max TFs

791 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ASG1 Saccharomyces cerevisiae YIL130W D 0.000
SAKL0E08998g Lachancea kluyveri SAKL0E08998g I 0.000
TBLA_0G02610 Tetrapisispora blattae TBLA_0G02610 I 0.000
SU7_1579 Saccharomyces arboricola SU7_1579 I 0.000
sr11453 Sporisorium reilianum sr11453 I 0.000
SPAPADRAFT_49410 Spathaspora passalidarum SPAPADRAFT_49410 I 0.000
PSEUBRA_SCAF1g00170 Pseudozyma brasiliensis PSEUBRA_SCAF1g00170 I 0.000
PICST_77168 Scheffersomyces stipitis PICST_77168 I 0.000
PHSY_004266 Pseudozyma hubeiensis PHSY_004266 I 0.000
PGUG_04028 Meyerozyma guilliermondii PGUG_04028 I 0.000
PaG_01650 Pseudozyma aphidis PaG_01650 I 0.000
NDAI_0B03850 Naumovozyma dairenensis NDAI_0B03850 I 0.000
TDEL_0C04480 Torulaspora delbrueckii TDEL_0C04480 I 0.000
TPHA_0F01380 Tetrapisispora phaffii TPHA_0F01380 I 0.000
UHOR_00180 Ustilago hordei UHOR_00180 I 0.000
SAKL0C03938g Lachancea kluyveri SAKL0C03938g I 0.000
Kwal_4754 Kluyveromyces waltii Kwal_4754 I 0.000
KLTH0G09108g Kluyveromyces thermotolerans KLTH0G09108g I 0.000
11848_Multiple Saccharomyces bayanus 11848_Multiple I 0.000
10716_YIL130W Saccharomyces paradoxus 10716_YIL130W I 0.000
10452_Multiple Saccharomyces mikatae 10452_Multiple I 0.000
Scas_Contig662.8 Saccharomyces castellii Scas_Contig662.8 I 0.000
estExt_genewise1_worm.C_chr_3.11235 Pichia stipitis estExt_genewise1_worm.C_chr_3.11235 I 0.000
YALI0_C22990g Yarrowia lipolytica YALI0_C22990g I 0.000
UM00113 Ustilago maydis UM00113 I 0.000
NCAS_0B06550 Naumovozyma castellii NCAS_0B06550 I 0.000
Moror_2492 Moniliophthora roreri Moror_2492 I 0.000
CTRG_05934 Candida tropicalis CTRG_05934 I 0.000
CTRG_00843 Candida tropicalis CTRG_00843 I 0.000
CORT_0A02680 Candida orthopsilosis CORT_0A02680 I 0.000
CLUG_02747 Clavispora lusitaniae CLUG_02747 I 0.000
CaO19.7800 Candida albicans CaO19.7800 I 0.000
CaO19.166 Candida albicans CaO19.166 I 0.000
CANTEDRAFT_104606 Candida tenuis CANTEDRAFT_104606 I 0.000
CAGL0G08844g Candida glabrata CAGL0G08844g I 0.000
BN7_630 Wickerhamomyces ciferrii BN7_630 I 0.000
BN7_2731 Wickerhamomyces ciferrii BN7_2731 I 0.000
PGUG_04028 Candida guilliermondii PGUG_04028 I 0.000
CPAG_01303 Candida parapsilosis CPAG_01303 I 0.000
DEHA2A12892g Debaryomyces hansenii DEHA2A12892g I 0.000
G210_0569 Candida maltosa G210_0569 I 0.000
LELG_00217 Lodderomyces elongisporus LELG_00217 I 0.000
LALA0_S04e08614g Lachancea lanzarotensis LALA0_S04e08614g I 0.000
KUCA_T00002124001 Kuraishia capsulata KUCA_T00002124001 I 0.000
Kpol_1039p11 Vanderwaltozyma polyspora Kpol_1039p11 I 0.000
KNAG_0E01760 Kazachstania naganishii KNAG_0E01760 I 0.000
KLTH0G09108g Lachancea thermotolerans KLTH0G09108g I 0.000
KLLA0_F04609g Kluyveromyces lactis KLLA0_F04609g I 0.000
KAFR_0J01710 Kazachstania africana KAFR_0J01710 I 0.000
GNLVRS01_PISO0J02957g Millerozyma farinosa GNLVRS01_PISO0J02957g I 0.000
GNLVRS01_PISO0F02997g Millerozyma farinosa GNLVRS01_PISO0F02997g I 0.000
CLUG_02747 Candida lusitaniae CLUG_02747 I 0.000
SCHCODRAFT_255656 Schizophyllum commune SCHCODRAFT_255656 N 0.000
SPBR_04687 Sporothrix brasiliensis SPBR_04687 N 0.000