GLYMA05G35811 (Glycine max)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GLYMA05G35811 T254118_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL91
M10922_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G66656_01 		0.792 0.792
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA05G35811.1 MADS box 10 57

Links

Other MADS box family TFs
Other Glycine max TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA08G03830 Glycine max GLYMA08G03830 I 1.000
GLYMA08G03820 Glycine max GLYMA08G03820 I 0.958
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.938
Ca_05023 Cicer arietinum Ca_05023 I 0.917
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.896
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.896
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.896
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.875
Ca_24185 Cicer arietinum Ca_24185 I 0.854
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.854
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.854
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.854
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.833
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.833
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.812
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.812
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.812
TCM_029518 Theobroma cacao TCM_029518 I 0.792
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.792
AGL91 Arabidopsis thaliana AT3G66656 D 0.792
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.792
GLYMA08G03793 Glycine max GLYMA08G03793 N 0.792
chr3.CM0059.60.nd Lotus japonicus chr3.CM0059.60.nd N 0.792
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.792
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.771
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.771
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.750
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.750
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.750
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.729
MDP0000274606 Malus domestica MDP0000274606 N 0.729
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.729
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.729
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.729
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.729
Pm030655 Prunus mume Pm030655 I 0.729
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.729
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.729
MTR_8g046350 Medicago truncatula MTR_8g046350 N 0.729
Bra021910 Brassica rapa Bra021910 I 0.729
29693.m002039 Ricinus communis 29693.m002039 I 0.729
Bo3g060720 Brassica oleracea Bo3g060720 I 0.729
Bo4g182590 Brassica oleracea Bo4g182590 I 0.729
Bra001209 Brassica rapa Bra001209 I 0.729
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.729
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.708
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.708
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.708
MDP0000120467 Malus domestica MDP0000120467 N 0.708
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.708
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.708
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
AGL29 Arabidopsis thaliana AT2G34440 I 0.708
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.708
Traes_7BS_4D5DE99CC Triticum aestivum Traes_7BS_4D5DE99CC I 0.700