GLYMA08G38880 (Glycine max)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GLYMA08G38880 T254151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL91
M10922_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G66656_01
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA08G38880.2 MADS box 10 57

Links

Other MADS box family TFs
Other Glycine max TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGL91 Arabidopsis thaliana AT3G66656 D 0.708
Ca_05023 Cicer arietinum Ca_05023 I 0.875
Ca_24185 Cicer arietinum Ca_24185 I 0.875
Pm030655 Prunus mume Pm030655 I 0.708
29693.m002039 Ricinus communis 29693.m002039 I 0.708
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.729
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.729
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.729
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.729
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.729
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.729
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.875
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.729
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.729
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.708
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.896
TCM_029518 Theobroma cacao TCM_029518 I 0.708
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.708
GLYMA08G03820 Glycine max GLYMA08G03820 I 0.812
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.833
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.896
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.938
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.833
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.854
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.833
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.896
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.833
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.812
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.833
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.708
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.708
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.708
chr3.CM0059.60.nd Lotus japonicus chr3.CM0059.60.nd N 0.833
MDP0000274606 Malus domestica MDP0000274606 N 0.708
MDP0000120467 Malus domestica MDP0000120467 N 0.729
GLYMA08G03793 Glycine max GLYMA08G03793 N 0.875
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.729
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.729
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.729
MTR_8g046350 Medicago truncatula MTR_8g046350 N 0.771
Cla019897 Citrullus lanatus Cla019897 N 0.708
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.729
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.708