GLYMA08G38880 (Glycine max)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GLYMA08G38880 T254151_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL91
M10922_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G66656_01
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA08G38880.2 MADS box 10 57

Links

Other MADS box family TFs
Other Glycine max TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30024.m001746 Ricinus communis 30024.m001746 N 0.000
30131.m007244 Ricinus communis 30131.m007244 N 0.000
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.000
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.000
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.000
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.000
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.000
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.000
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.000
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.000
Ca_11133 Cicer arietinum Ca_11133 N 0.000
Ca_27441 Cicer arietinum Ca_27441 N 0.000
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.000
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.000
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.000
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.000
Cla006433 Citrullus lanatus Cla006433 N 0.000
Cla020893 Citrullus lanatus Cla020893 N 0.000
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.000
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.000
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.000
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.000
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.000
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.000
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.000
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.000
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.000
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.000
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.000
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.000
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.000
Lus10019773.g Linum usitatissimum Lus10019773.g N 0.000
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.000
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.000
mgf022906m Mimulus guttatus mgf022906m N 0.000
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.000
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.000
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.000
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.000
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.000
PK02707.1 Cannabis sativa PK02707.1 N 0.000
Pm012190 Prunus mume Pm012190 N 0.000
Pm016466 Prunus mume Pm016466 N 0.000
Pm029840 Prunus mume Pm029840 N 0.000
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.000
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.000
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.000
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.000
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.000
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.000
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.000
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.000
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.000
SCL3 Arabidopsis thaliana AT1G50420 N 0.000
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.000
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.000
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.000
TCM_040833 Theobroma cacao TCM_040833 N 0.000
TCM_042392 Theobroma cacao TCM_042392 N 0.000
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.000
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.000