CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA17G01771
(
Glycine max
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
GLYMA17G01771
T254220_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA17G01771.1
MADS box
22
69
KLEKASNKQVTFSKRRTGLFKKASELCILCNAYVAIIVFSPADKLFCF
Links
Other
MADS box
family TFs
Other
Glycine max
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA20G27361
Glycine max
GLYMA20G27361
N
0.917
Ca_04658
Cicer arietinum
Ca_04658
N
0.896
Ca_18845
Cicer arietinum
Ca_18845
N
0.812
Cucsa.342610
Cucumis sativus
Cucsa.342610
N
0.812
chr5.LjT25B19.200.nd
Lotus japonicus
chr5.LjT25B19.200.nd
N
0.812
MTR_4g036915
Medicago truncatula
MTR_4g036915
I
0.792
MTR_7g028448
Medicago truncatula
MTR_7g028448
I
0.792
Cla010744
Citrullus lanatus
Cla010744
N
0.792
MTR_8g086290
Medicago truncatula
MTR_8g086290
N
0.771
MTR_4g127140
Medicago truncatula
MTR_4g127140
N
0.771
Pm021070
Prunus mume
Pm021070
N
0.750
PRUPE_ppa017246mg
Prunus persica
PRUPE_ppa017246mg
N
0.750
gene00615-v1.0-hybrid
Fragaria vesca
gene00615-v1.0-hybrid
N
0.750
TCM_040735
Theobroma cacao
TCM_040735
N
0.750
MTR_2g105290
Medicago truncatula
MTR_2g105290
N
0.750
Thhalv10012100m.g
Eutrema salsugineum
Thhalv10012100m.g
I
0.737
Pm021018
Prunus mume
Pm021018
N
0.729
Bostr.8705s0016
Boechera stricta
Bostr.8705s0016
N
0.729
MTR_1g075600
Medicago truncatula
MTR_1g075600
N
0.729
chr1.CM0088.830.nc
Lotus japonicus
chr1.CM0088.830.nc
N
0.729
Aquca_054_00126
Aquilegia coerulea
Aquca_054_00126
N
0.729
Bra026764
Brassica rapa
Bra026764
N
0.729
Gorai.012G163200
Gossypium raimondii
Gorai.012G163200
N
0.729
Gorai.N026300
Gossypium raimondii
Gorai.N026300
N
0.729
MTR_1g077360
Medicago truncatula
MTR_1g077360
N
0.729
Pm021071
Prunus mume
Pm021071
N
0.729
VIT_03s0088g00600
Vitis vinifera
VIT_03s0088g00600
N
0.729
Thhalv10003338m.g
Eutrema salsugineum
Thhalv10003338m.g
N
0.729
Solyc01g106730.1
Solanum lycopersicum
Solyc01g106730.1
N
0.729
PRUPE_ppa026127mg
Prunus persica
PRUPE_ppa026127mg
N
0.729
PRUPE_ppa026089mg
Prunus persica
PRUPE_ppa026089mg
N
0.729
Eucgr.G01185
Eucalyptus grandis
Eucgr.G01185
N
0.729
Thhalv10000479m.g
Eutrema salsugineum
Thhalv10000479m.g
N
0.729
TCM_006325
Theobroma cacao
TCM_006325
N
0.729
VIT_03s0088g00590
Vitis vinifera
VIT_03s0088g00590
N
0.729
orange1.1g039654m.g
Citrus sinensis
orange1.1g039654m.g
N
0.729
Ciclev10030142m.g
Citrus clementina
Ciclev10030142m.g
N
0.729
LjSGA_079719.1
Lotus japonicus
LjSGA_079719.1
N
0.708
gene01788-v1.0-hybrid
Fragaria vesca
gene01788-v1.0-hybrid
I
0.708
evm.TU.supercontig_20.86
Carica papaya
evm.TU.supercontig_20.86
N
0.708
evm.TU.supercontig_106.18
Carica papaya
evm.TU.supercontig_106.18
N
0.708
gene01789-v1.0-hybrid
Fragaria vesca
gene01789-v1.0-hybrid
N
0.708
MDP0000168914
Malus domestica
MDP0000168914
N
0.708
SapurV1A.0019s0690
Salix purpurea
SapurV1A.0019s0690
N
0.708
Thhalv10015908m.g
Eutrema salsugineum
Thhalv10015908m.g
N
0.708
MDP0000434703
Malus domestica
MDP0000434703
I
0.708
Lus10020511.g
Linum usitatissimum
Lus10020511.g
N
0.708
Lus10012449.g
Linum usitatissimum
Lus10012449.g
N
0.708
Thhalv10027307m.g
Eutrema salsugineum
Thhalv10027307m.g
N
0.708
Gorai.006G127800
Gossypium raimondii
Gorai.006G127800
N
0.708
29613.m000367
Ricinus communis
29613.m000367
N
0.708
TCM_006323
Theobroma cacao
TCM_006323
N
0.708
scaffold_400572.1
Arabidopsis lyrata
scaffold_400572.1
N
0.708
TCM_012489
Theobroma cacao
TCM_012489
N
0.708
VIT_03s0088g00510
Vitis vinifera
VIT_03s0088g00510
N
0.708
Ca_07607
Cicer arietinum
Ca_07607
N
0.708
MTR_5g045560
Medicago truncatula
MTR_5g045560
N
0.708
MTR_3g052920
Medicago truncatula
MTR_3g052920
N
0.708
AGL61
Arabidopsis thaliana
AT2G24840
N
0.708
AGL62
Arabidopsis thaliana
AT5G60440
I
0.708
GLYMA20G27320
Glycine max
GLYMA20G27320
N
0.708
GLYMA20G27350
Glycine max
GLYMA20G27350
N
0.708
Ca_26354
Cicer arietinum
Ca_26354
N
0.708
Cla006571
Citrullus lanatus
Cla006571
N
0.708
Bostr.26833s0197
Boechera stricta
Bostr.26833s0197
N
0.708
Cagra.1004s0007
Capsella grandiflora
Cagra.1004s0007
N
0.708
Cagra.2519s0016
Capsella grandiflora
Cagra.2519s0016
N
0.708
Carubv10024914m.g
Capsella rubella
Carubv10024914m.g
N
0.708
Aquca_040_00096
Aquilegia coerulea
Aquca_040_00096
N
0.708
mgf022147m
Mimulus guttatus
mgf022147m
N
0.708
AGL61
Arabidopsis lyrata
Al_scaffold_0004_541
N
0.708
cassava33542.m1
Manihot esculenta
cassava33542.m1
N
0.708
cassava41915.m1
Manihot esculenta
cassava41915.m1
N
0.708
Cucsa.298560
Cucumis sativus
Cucsa.298560
N
0.708
Carubv10028580m.g
Capsella rubella
Carubv10028580m.g
N
0.708