GRMZM2G128953 (Zea mays)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GRMZM2G128953 T254296_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
M17_MAIZE
M10959_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$M17_01
0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G128953_P01 MADS box 10 57
GRMZM2G128953_P02 MADS box 10 57

Links

Other MADS box family TFs
Other Zea mays TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AC233912.1_FG001 Zea mays AC233912.1_FG001 I 1.000
Pavir.Ga00461 Panicum virgatum Pavir.Ga00461 I 0.979
GRMZM2G135018 Zea mays GRMZM2G135018 I 0.979
GRMZM2G005155 Zea mays GRMZM2G005155 I 0.979
Sb06g028420 Sorghum bicolor Sb06g028420 I 0.979
GRMZM2G446426 Zea mays GRMZM2G446426 N 0.958
Pavir.Gb00526 Panicum virgatum Pavir.Gb00526 I 0.958
GRMZM2G137387 Zea mays GRMZM2G137387 I 0.958
GRMZM2G148220 Zea mays GRMZM2G148220 N 0.938
LPERR04G20730 Leersia perrieri LPERR04G20730 I 0.917
OGLUM04G25090 Oryza glumaepatula OGLUM04G25090 I 0.896
ORUFI04G26810 Oryza rufipogon ORUFI04G26810 I 0.896
MADS31 Oryza sativa OS04G0614100 I 0.896
ORGLA04G0222300 Oryza glaberrima ORGLA04G0222300 I 0.896
OPUNC04G22650 Oryza punctata OPUNC04G22650 I 0.896
OBART04G25610 Oryza barthii OBART04G25610 I 0.896
OB04G32080 Oryza brachyantha OB04G32080 I 0.896
OMERI04G20840 Oryza meridionalis OMERI04G20840 I 0.896
BGIOSGA017110 Oryza indica BGIOSGA017110 I 0.896
BRADI5G21700 Brachypodium distachyon BRADI5G21700 I 0.875
OLONG_021245 Oryza longistaminata OLONG_021245 I 0.875
MLOC_12133 Hordeum vulgare MLOC_12133 I 0.854
Traes_2AL_8DF89AA72 Triticum aestivum Traes_2AL_8DF89AA72 I 0.854
Traes_2DL_6CD5A5CD9 Triticum aestivum Traes_2DL_6CD5A5CD9 I 0.854
TRIUR3_18402 Triticum urartu TRIUR3_18402 I 0.854
F775_05654 Aegilops tauschii F775_05654 I 0.854
GSMUA_Achr2G02660_001 Musa acuminata GSMUA_Achr2G02660_001 I 0.833
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.792
Traes_6BS_5789476CB Triticum aestivum Traes_6BS_5789476CB I 0.750
Traes_6AS_57E50EE92 Triticum aestivum Traes_6AS_57E50EE92 I 0.750
Pavir.Da00991 Panicum virgatum Pavir.Da00991 I 0.750
Traes_6DS_9BBDCC9F7 Triticum aestivum Traes_6DS_9BBDCC9F7 I 0.750
F775_30836 Aegilops tauschii F775_30836 I 0.750
MLOC_65966 Hordeum vulgare MLOC_65966 I 0.750
TRIUR3_26896 Triticum urartu TRIUR3_26896 I 0.750
BRADI3G05260 Brachypodium distachyon BRADI3G05260 I 0.750
ORUFI06G14980 Oryza rufipogon ORUFI06G14980 I 0.729
MADS29 Oryza sativa OS02G0170300 I 0.729
ORUFI02G05500 Oryza rufipogon ORUFI02G05500 I 0.729
OPUNC06G13170 Oryza punctata OPUNC06G13170 I 0.729
OS06G0347700 Oryza sativa OS06G0347700 I 0.729
ORGLA02G0049700 Oryza glaberrima ORGLA02G0049700 I 0.729
ORGLA06G0125600 Oryza glaberrima ORGLA06G0125600 I 0.729
Carubv10026982m.g Capsella rubella Carubv10026982m.g I 0.729
Pavir.Ab00475 Panicum virgatum Pavir.Ab00475 I 0.729
TT16 Vitis vinifera VIT_01s0011g01560 I 0.729
Si018183m.g Setaria italica Si018183m.g I 0.729
AMTR_s00002p00262770 Amborella trichopoda AMTR_s00002p00262770 I 0.729
Pavir.Aa03173 Panicum virgatum Pavir.Aa03173 I 0.729
Sb04g004736 Sorghum bicolor Sb04g004736 I 0.729
BGIOSGA007056 Oryza indica BGIOSGA007056 I 0.729
OGLUM02G05240 Oryza glumaepatula OGLUM02G05240 I 0.729
OGLUM06G15040 Oryza glumaepatula OGLUM06G15040 I 0.729
OLONG_018231 Oryza longistaminata OLONG_018231 I 0.729
OBART06G14060 Oryza barthii OBART06G14060 I 0.729
OB02G14670 Oryza brachyantha OB02G14670 I 0.729
F775_15097 Aegilops tauschii F775_15097 I 0.729
LPERR02G04610 Leersia perrieri LPERR02G04610 I 0.729
M17_MAIZE Zea mays M17_MAIZE D 0.729
OMERI02G06250 Oryza meridionalis OMERI02G06250 I 0.729
OBART02G05380 Oryza barthii OBART02G05380 I 0.729
ONIVA02G05710 Oryza nivara ONIVA02G05710 I 0.729
OMERI06G15180 Oryza meridionalis OMERI06G15180 I 0.729
OPUNC02G04560 Oryza punctata OPUNC02G04560 I 0.729
BGIOSGA022872 Oryza indica BGIOSGA022872 I 0.729
ONIVA06G16870 Oryza nivara ONIVA06G16870 I 0.729
OLONG_023633 Oryza longistaminata OLONG_023633 I 0.711
Carubv10027093m.g Capsella rubella Carubv10027093m.g I 0.708
Cagra.0277s0030 Capsella grandiflora Cagra.0277s0030 I 0.708
Bostr.26833s0022 Boechera stricta Bostr.26833s0022 I 0.708
GRMZM2G055782 Zea mays GRMZM2G055782 I 0.708
GRMZM2G130382 Zea mays GRMZM2G130382 I 0.708
Pavir.J09556 Panicum virgatum Pavir.J09556 I 0.708
Thhalv10015303m.g Eutrema salsugineum Thhalv10015303m.g I 0.708
AGL71 Arabidopsis lyrata Al_scaffold_0008_1558 I 0.708
AMTR_s00001p00270400 Amborella trichopoda AMTR_s00001p00270400 I 0.708
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.708
AGL16 Arabidopsis lyrata fgenesh2_kg.5__2158__AT3G57230.1 I 0.708
AGL15 Vitis vinifera VIT_13s0158g00100 I 0.708
AGL71 Arabidopsis thaliana AT5G51870 I 0.708
Bo1g007520 Brassica oleracea Bo1g007520 I 0.708
Solyc04g076680.2 Solanum lycopersicum Solyc04g076680.2 I 0.708
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.708
Bra011509 Brassica rapa Bra011509 I 0.708
OPUNC04G12890 Oryza punctata OPUNC04G12890 I 0.708
mgf025830m Mimulus guttatus mgf025830m I 0.708
PGSC0003DMG400009349 Solanum tuberosum PGSC0003DMG400009349 I 0.708
OB06G22200 Oryza brachyantha OB06G22200 I 0.708
Traes_7BL_F5B6736D0 Triticum aestivum Traes_7BL_F5B6736D0 I 0.708
Aquca_022_00241 Aquilegia coerulea Aquca_022_00241 I 0.708