GRMZM2G161666 (Zea mays)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GRMZM2G161666 T254312_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL15
M06992_2.00
Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN

NTTTCYWHWTTDGGWAANW
Dap-seq
OMalley et al.(2016)
AGL15_col_a
0.729 0.729
AGL15
M06993_2.00
Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH

DDNTTTCYHHWTTDGGWAANH
Dap-seq
OMalley et al.(2016)
AGL15_colamp_a
0.729 0.729
AGL15
M10927_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_01
0.729 0.729
AGL15
M10928_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_02
0.729 0.729
M17_MAIZE
M10959_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$M17_01
0.729 0.729
Q9ATE8_PETHY
M11011_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP21_01
0.708 0.708
Q9ATE2_PETHY
M11007_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP29_01
0.708 0.708
Q40591_TOBAC
M11002_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_03
0.708 0.708
Q7X9I6_MALDO
M11023_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS12_02
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G161666_P01 MADS box 10 57

Links

Other MADS box family TFs
Other Zea mays TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Si007187m.g Setaria italica Si007187m.g I 0.938
Pavir.J10823 Panicum virgatum Pavir.J10823 I 0.917
Pavir.Db00414 Panicum virgatum Pavir.Db00414 I 0.854
Sb10g026690 Sorghum bicolor Sb10g026690 I 0.854
GRMZM2G038878 Zea mays GRMZM2G038878 N 0.841
LPERR12G10770 Leersia perrieri LPERR12G10770 I 0.771
Cucsa.251170 Cucumis sativus Cucsa.251170 I 0.750
BGIOSGA015023 Oryza indica BGIOSGA015023 I 0.733
ONIVA02G05710 Oryza nivara ONIVA02G05710 I 0.729
OPUNC02G04560 Oryza punctata OPUNC02G04560 I 0.729
ORGLA02G0049700 Oryza glaberrima ORGLA02G0049700 I 0.729
ONIVA12G13220 Oryza nivara ONIVA12G13220 I 0.729
OMERI02G06250 Oryza meridionalis OMERI02G06250 I 0.729
OGLUM02G05240 Oryza glumaepatula OGLUM02G05240 I 0.729
OGLUM12G14590 Oryza glumaepatula OGLUM12G14590 I 0.729
OLONG_028574 Oryza longistaminata OLONG_028574 I 0.729
ORGLA12G0116000 Oryza glaberrima ORGLA12G0116000 I 0.729
OMERI12G08970 Oryza meridionalis OMERI12G08970 I 0.729
ORUFI12G14120 Oryza rufipogon ORUFI12G14120 I 0.729
Sb04g004736 Sorghum bicolor Sb04g004736 I 0.729
Pavir.Ab00475 Panicum virgatum Pavir.Ab00475 I 0.729
Si018183m.g Setaria italica Si018183m.g I 0.729
Cla006333 Citrullus lanatus Cla006333 I 0.729
Sb01g049020 Sorghum bicolor Sb01g049020 I 0.729
AGL15 Arabidopsis thaliana AT5G13790 D 0.729
Pavir.Aa03173 Panicum virgatum Pavir.Aa03173 I 0.729
MADS29 Oryza sativa OS02G0170300 I 0.729
MADS20 Oryza sativa OS12G0501700 I 0.729
OBART12G13000 Oryza barthii OBART12G13000 I 0.729
ORUFI02G05500 Oryza rufipogon ORUFI02G05500 I 0.729
POPTR_0017s13400 Populus trichocarpa POPTR_0017s13400 I 0.729
OBART02G05380 Oryza barthii OBART02G05380 I 0.729
BGIOSGA007056 Oryza indica BGIOSGA007056 I 0.729
GRMZM2G070034 Zea mays GRMZM2G070034 I 0.729
LPERR02G04610 Leersia perrieri LPERR02G04610 I 0.729
BGIOSGA036149 Oryza indica BGIOSGA036149 I 0.729
M17_MAIZE Zea mays M17_MAIZE D 0.729
OB02G14670 Oryza brachyantha OB02G14670 I 0.729
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.724
Thhalv10019132m.g Eutrema salsugineum Thhalv10019132m.g I 0.723
Bo9g166450 Brassica oleracea Bo9g166450 I 0.708
Bostr.2902s0113 Boechera stricta Bostr.2902s0113 I 0.708
fgenesh1_pg.scaffold_118000119 Physcomitrella patens fgenesh1_pg.scaffold_118000119 I 0.708
Aquca_013_00471 Aquilegia coerulea Aquca_013_00471 I 0.708
Cucsa.174530 Cucumis sativus Cucsa.174530 I 0.708
e_gw1.55.13.1 Physcomitrella patens e_gw1.55.13.1 I 0.708
Q9ATE8_PETHY Petunia x hybrida Q9ATE8_PETHY D 0.708
Pm015397 Prunus mume Pm015397 I 0.708
Q40591_TOBAC Nicotiana tabacum Q40591_TOBAC D 0.708
Cagra.5588s0006 Capsella grandiflora Cagra.5588s0006 I 0.708
Q9ATE2_PETHY Petunia x hybrida Q9ATE2_PETHY D 0.708
Cla010989 Citrullus lanatus Cla010989 I 0.708
evm.TU.supercontig_125.55 Carica papaya evm.TU.supercontig_125.55 I 0.708
Pavir.J22336 Panicum virgatum Pavir.J22336 I 0.708
Bo3g009340 Brassica oleracea Bo3g009340 I 0.708
Q7X9I6_MALDO Malus domestica Q7X9I6_MALDO D 0.708
SapurV1A.0024s0570 Salix purpurea SapurV1A.0024s0570 I 0.708
PK08595.1 Cannabis sativa PK08595.1 I 0.708
orange1.1g039982m.g Citrus sinensis orange1.1g039982m.g I 0.708
MDP0000132738 Malus domestica MDP0000132738 I 0.708
Eucgr.H04618 Eucalyptus grandis Eucgr.H04618 I 0.708
Ciclev10005698m.g Citrus clementina Ciclev10005698m.g I 0.708
TRIUR3_26896 Triticum urartu TRIUR3_26896 I 0.708
Lus10027404.g Linum usitatissimum Lus10027404.g I 0.708
Lus10031665.g Linum usitatissimum Lus10031665.g I 0.708
Carubv10002596m.g Capsella rubella Carubv10002596m.g I 0.708
Traes_6DS_9BBDCC9F7 Triticum aestivum Traes_6DS_9BBDCC9F7 I 0.708
GRMZM2G171365 Zea mays GRMZM2G171365 I 0.708
GSMUA_Achr11G21460_001 Musa acuminata GSMUA_Achr11G21460_001 I 0.708
GRMZM2G130382 Zea mays GRMZM2G130382 I 0.708
POPTR_0002s15310 Populus trichocarpa POPTR_0002s15310 I 0.708
GRMZM2G026223 Zea mays GRMZM2G026223 I 0.708
POPTR_0004s11430 Populus trichocarpa POPTR_0004s11430 I 0.708
GSMUA_Achr2G04340_001 Musa acuminata GSMUA_Achr2G04340_001 I 0.708
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.708
MLOC_65966 Hordeum vulgare MLOC_65966 I 0.708
OB12G20680 Oryza brachyantha OB12G20680 I 0.708
GSMUA_Achr6G14760_001 Musa acuminata GSMUA_Achr6G14760_001 I 0.708
GSMUA_Achr5G20280_001 Musa acuminata GSMUA_Achr5G20280_001 I 0.708
OPUNC12G11630 Oryza punctata OPUNC12G11630 I 0.708
PRUPE_ppa010249mg Prunus persica PRUPE_ppa010249mg I 0.708
Sb01g030570 Sorghum bicolor Sb01g030570 I 0.708
Traes_5DS_82FA431DB Triticum aestivum Traes_5DS_82FA431DB I 0.708
Solyc02g089210.2 Solanum lycopersicum Solyc02g089210.2 I 0.708
Traes_6AS_57E50EE92 Triticum aestivum Traes_6AS_57E50EE92 I 0.708
Traes_6BS_5789476CB Triticum aestivum Traes_6BS_5789476CB I 0.708
Traes_7BS_209950516 Triticum aestivum Traes_7BS_209950516 I 0.708
Si038299m.g Setaria italica Si038299m.g I 0.708
Si038257m.g Setaria italica Si038257m.g I 0.708
F775_30836 Aegilops tauschii F775_30836 I 0.708
AGL15 Arabidopsis lyrata fgenesh2_kg.6__1336__AT5G13790.1 I 0.708
F775_15097 Aegilops tauschii F775_15097 I 0.708
BRADI3G05260 Brachypodium distachyon BRADI3G05260 I 0.708
Bra006214 Brassica rapa Bra006214 I 0.708
Traes_7DS_366A869CF Triticum aestivum Traes_7DS_366A869CF I 0.707
Bo6g094120 Brassica oleracea Bo6g094120 I 0.702
Bra003919 Brassica rapa Bra003919 I 0.702