CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G441115
(
Zea mays
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
GRMZM2G441115
T254323_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
0.739
0.739
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G441115_P01
MADS box
10
55
RLENNSGRQVTYSKRRSGILKKAKELSILCDIDLMLIMFSPTDKPT
Links
Other
MADS box
family TFs
Other
Zea mays
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb05g025970
Sorghum bicolor
Sb05g025970
I
0.913
LPERR11G18320
Leersia perrieri
LPERR11G18320
N
0.870
Pavir.J04162
Panicum virgatum
Pavir.J04162
I
0.870
Pavir.Hb00170
Panicum virgatum
Pavir.Hb00170
I
0.870
PDK_20s1342861g001
Phoenix dactylifera
PDK_20s1342861g001
I
0.870
PDK_20s1352301g001
Phoenix dactylifera
PDK_20s1352301g001
I
0.851
OS11G0658700
Oryza sativa
OS11G0658700
N
0.848
ORUFI11G23650
Oryza rufipogon
ORUFI11G23650
N
0.848
OBART11G21780
Oryza barthii
OBART11G21780
N
0.848
ORGLA11G0175900
Oryza glaberrima
ORGLA11G0175900
N
0.848
Traes_4BS_8B4AFA7C2
Triticum aestivum
Traes_4BS_8B4AFA7C2
I
0.848
Aquca_002_00641
Aquilegia coerulea
Aquca_002_00641
I
0.848
TRIUR3_33223
Triticum urartu
TRIUR3_33223
I
0.848
MLOC_11474
Hordeum vulgare
MLOC_11474
I
0.848
Traes_4AL_8DBE120BC
Triticum aestivum
Traes_4AL_8DBE120BC
I
0.848
Si028357m.g
Setaria italica
Si028357m.g
N
0.848
Traes_4DS_4C4EB1D21
Triticum aestivum
Traes_4DS_4C4EB1D21
I
0.848
F775_13266
Aegilops tauschii
F775_13266
I
0.848
BRADI4G11097
Brachypodium distachyon
BRADI4G11097
I
0.826
OMERI11G18020
Oryza meridionalis
OMERI11G18020
N
0.826
BGIOSGA035654
Oryza indica
BGIOSGA035654
N
0.826
OGLUM11G21110
Oryza glumaepatula
OGLUM11G21110
N
0.826
OLONG_008007
Oryza longistaminata
OLONG_008007
N
0.826
Eucgr.B00522
Eucalyptus grandis
Eucgr.B00522
I
0.812
Thhalv10007954m.g
Eutrema salsugineum
Thhalv10007954m.g
I
0.804
OPUNC11G18320
Oryza punctata
OPUNC11G18320
N
0.804
AMTR_s00010p00264750
Amborella trichopoda
AMTR_s00010p00264750
I
0.804
cassava46162.m1
Manihot esculenta
cassava46162.m1
I
0.804
TCM_014051
Theobroma cacao
TCM_014051
I
0.804
GSMUA_Achr3G24170_001
Musa acuminata
GSMUA_Achr3G24170_001
I
0.804
Lus10019089.g
Linum usitatissimum
Lus10019089.g
I
0.792
MTR_4g108720
Medicago truncatula
MTR_4g108720
I
0.783
Lus10034464.g
Linum usitatissimum
Lus10034464.g
I
0.783
Bra025685
Brassica rapa
Bra025685
I
0.783
Thhalv10019839m.g
Eutrema salsugineum
Thhalv10019839m.g
I
0.783
30138.m004061
Ricinus communis
30138.m004061
I
0.771
PK21701.1
Cannabis sativa
PK21701.1
I
0.771
Bra031049
Brassica rapa
Bra031049
I
0.771
Bo8g104060
Brassica oleracea
Bo8g104060
I
0.771
Bo8g068060
Brassica oleracea
Bo8g068060
I
0.771
Gorai.001G074200
Gossypium raimondii
Gorai.001G074200
I
0.771
Bra016544
Brassica rapa
Bra016544
I
0.771
Gorai.008G194100
Gossypium raimondii
Gorai.008G194100
I
0.771
chr4.CM0087.920.nd
Lotus japonicus
chr4.CM0087.920.nd
I
0.761
Cla010361
Citrullus lanatus
Cla010361
I
0.761
GLYMA17G10941
Glycine max
GLYMA17G10941
I
0.761
cassava19791.m1
Manihot esculenta
cassava19791.m1
I
0.750
GSMUA_Achr2G01740_001
Musa acuminata
GSMUA_Achr2G01740_001
I
0.745
Cucsa.284960
Cucumis sativus
Cucsa.284960
I
0.739
AGL33
Populus trichocarpa
POPTR_0018s08400
N
0.739
gene26028-v1.0-hybrid
Fragaria vesca
gene26028-v1.0-hybrid
I
0.739
Ciclev10020575m.g
Citrus clementina
Ciclev10020575m.g
I
0.729
AGL65
Vitis vinifera
VIT_17s0000g06340
I
0.729
orange1.1g017511m.g
Citrus sinensis
orange1.1g017511m.g
I
0.729
Traes_7BL_7F4124E70
Triticum aestivum
Traes_7BL_7F4124E70
I
0.720
MDP0000147667
Malus domestica
MDP0000147667
I
0.717
cassava17346.m1
Manihot esculenta
cassava17346.m1
I
0.717
Pm006479
Prunus mume
Pm006479
I
0.717
PRUPE_ppa017562mg
Prunus persica
PRUPE_ppa017562mg
I
0.717
PRUPE_ppa015857mg
Prunus persica
PRUPE_ppa015857mg
I
0.717
GSMUA_Achr11G14240_001
Musa acuminata
GSMUA_Achr11G14240_001
N
0.717
29813.m001508
Ricinus communis
29813.m001508
I
0.717
Pm024895
Prunus mume
Pm024895
I
0.717
MDP0000146231
Malus domestica
MDP0000146231
I
0.717
MDP0000773068
Malus domestica
MDP0000773068
I
0.711
MDP0000146415
Malus domestica
MDP0000146415
I
0.711
MDP0000919323
Malus domestica
MDP0000919323
I
0.711
AGL65
Arabidopsis thaliana
AT1G18750
D
0.708
Bostr.7128s0485
Boechera stricta
Bostr.7128s0485
I
0.708
AGL65
Arabidopsis lyrata
fgenesh2_kg.1__2055__AT1G18750.1
I
0.708