CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr11G14240_001
(
Musa acuminata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
GSMUA_Achr11G14240_001
T254346_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr11P14240_001
MADS box
10
55
RLENSNSRQVTYSKRKIGLTNKAKELSILCDIDLVLLMFAPNGKPT
Links
Other
MADS box
family TFs
Other
Musa acuminata
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr3G24170_001
Musa acuminata
GSMUA_Achr3G24170_001
I
0.891
GSMUA_Achr2G01740_001
Musa acuminata
GSMUA_Achr2G01740_001
I
0.891
Sb05g025970
Sorghum bicolor
Sb05g025970
I
0.783
Bo8g104060
Brassica oleracea
Bo8g104060
I
0.761
Bo8g068060
Brassica oleracea
Bo8g068060
I
0.761
Pavir.J04162
Panicum virgatum
Pavir.J04162
I
0.761
Pavir.Hb00170
Panicum virgatum
Pavir.Hb00170
I
0.761
PDK_20s1342861g001
Phoenix dactylifera
PDK_20s1342861g001
I
0.761
Bra016544
Brassica rapa
Bra016544
I
0.761
Bra031049
Brassica rapa
Bra031049
I
0.761
OLONG_008007
Oryza longistaminata
OLONG_008007
N
0.739
Cla010361
Citrullus lanatus
Cla010361
I
0.739
OGLUM11G21110
Oryza glumaepatula
OGLUM11G21110
N
0.739
MLOC_11474
Hordeum vulgare
MLOC_11474
I
0.739
Thhalv10007954m.g
Eutrema salsugineum
Thhalv10007954m.g
I
0.739
PDK_20s1352301g001
Phoenix dactylifera
PDK_20s1352301g001
I
0.739
Bra025685
Brassica rapa
Bra025685
I
0.739
TRIUR3_33223
Triticum urartu
TRIUR3_33223
I
0.717
Pm006479
Prunus mume
Pm006479
I
0.717
Aquca_002_00641
Aquilegia coerulea
Aquca_002_00641
I
0.717
Traes_4DS_4C4EB1D21
Triticum aestivum
Traes_4DS_4C4EB1D21
I
0.717
Thhalv10019839m.g
Eutrema salsugineum
Thhalv10019839m.g
I
0.717
MDP0000147667
Malus domestica
MDP0000147667
I
0.717
Cucsa.284960
Cucumis sativus
Cucsa.284960
I
0.717
AGL33
Populus trichocarpa
POPTR_0018s08400
N
0.717
OMERI11G18020
Oryza meridionalis
OMERI11G18020
N
0.717
ORGLA11G0175900
Oryza glaberrima
ORGLA11G0175900
N
0.717
OBART11G21780
Oryza barthii
OBART11G21780
N
0.717
GRMZM2G441115
Zea mays
GRMZM2G441115
I
0.717
GLYMA07G35610
Glycine max
GLYMA07G35610
N
0.717
ORUFI11G23650
Oryza rufipogon
ORUFI11G23650
N
0.717
Traes_4BS_8B4AFA7C2
Triticum aestivum
Traes_4BS_8B4AFA7C2
I
0.717
Si028357m.g
Setaria italica
Si028357m.g
N
0.717
Traes_4AL_8DBE120BC
Triticum aestivum
Traes_4AL_8DBE120BC
I
0.717
PRUPE_ppa017562mg
Prunus persica
PRUPE_ppa017562mg
I
0.717
AMTR_s00010p00264750
Amborella trichopoda
AMTR_s00010p00264750
I
0.717
OS11G0658700
Oryza sativa
OS11G0658700
N
0.717
F775_13266
Aegilops tauschii
F775_13266
I
0.717
Eucgr.B00522
Eucalyptus grandis
Eucgr.B00522
I
0.708