GSMUA_Achr5G01230_001 (Musa acuminata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GSMUA_Achr5G01230_001 T254384_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MADS2
M10966_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_02
0.792 0.792
FBP1_PETHY
M10996_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP1_01
0.771 0.771
Q9AVU7_MALDO
M11027_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PI_01
0.771 0.771
M17_MAIZE
M10959_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$M17_01
0.750 0.750
Q9AR49_MAIZE
M10980_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$M29_01
0.750 0.750
MADS2_PETHY
M10998_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_01
0.750 0.750
Q9FVN1_MAIZE
M10982_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_03
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P01230_001 MADS box 10 57

Links

Other MADS box family TFs
Other Musa acuminata TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29648.m001978 Ricinus communis 29648.m001978 I 0.771
29804.m001536 Ricinus communis 29804.m001536 I 0.708
AMTR_s00001p00217560 Amborella trichopoda AMTR_s00001p00217560 I 0.708
AMTR_s00001p00270400 Amborella trichopoda AMTR_s00001p00270400 I 0.708
AMTR_s00002p00262770 Amborella trichopoda AMTR_s00002p00262770 I 0.708
AMTR_s00066p00109320 Amborella trichopoda AMTR_s00066p00109320 I 0.708
AMTR_s00089p00081270 Amborella trichopoda AMTR_s00089p00081270 I 0.771
Aquca_007_00336 Aquilegia coerulea Aquca_007_00336 I 0.708
Aquca_014_00308 Aquilegia coerulea Aquca_014_00308 I 0.812
Aquca_022_00241 Aquilegia coerulea Aquca_022_00241 I 0.708
BGIOSGA000377 Oryza indica BGIOSGA000377 I 0.792
BGIOSGA007056 Oryza indica BGIOSGA007056 I 0.729
BGIOSGA019900 Oryza indica BGIOSGA019900 I 0.792
Bo7g098190 Brassica oleracea Bo7g098190 I 0.708
Bra012997 Brassica rapa Bra012997 I 0.708
BRADI1G59250 Brachypodium distachyon BRADI1G59250 I 0.708
BRADI2G57000 Brachypodium distachyon BRADI2G57000 I 0.729
BRADI3G05260 Brachypodium distachyon BRADI3G05260 I 0.708
BRADI5G12440 Brachypodium distachyon BRADI5G12440 I 0.708
BRADI5G21700 Brachypodium distachyon BRADI5G21700 I 0.708
cassava26340.m1 Manihot esculenta cassava26340.m1 I 0.708
cassava32003.m1 Manihot esculenta cassava32003.m1 I 0.812
cassava33721.m1 Manihot esculenta cassava33721.m1 I 0.729
Ca_03887 Cicer arietinum Ca_03887 I 0.729
Ciclev10009338m.g Citrus clementina Ciclev10009338m.g I 0.708
Cla023547 Citrullus lanatus Cla023547 I 0.812
Cucsa.018420 Cucumis sativus Cucsa.018420 I 0.812
Eucgr.E01006 Eucalyptus grandis Eucgr.E01006 I 0.812
Eucgr.E01007 Eucalyptus grandis Eucgr.E01007 I 0.708
evm.TU.supercontig_26.316 Carica papaya evm.TU.supercontig_26.316 I 0.750
F775_27066 Aegilops tauschii F775_27066 I 0.708
F775_30836 Aegilops tauschii F775_30836 I 0.708
FBP1_PETHY Petunia x hybrida FBP1_PETHY D 0.771
gene11267-v1.0-hybrid Fragaria vesca gene11267-v1.0-hybrid I 0.750
gene11268-v1.0-hybrid Fragaria vesca gene11268-v1.0-hybrid I 0.729
GLYMA01G02525 Glycine max GLYMA01G02525 I 0.729
GLYMA04G42420 Glycine max GLYMA04G42420 I 0.750
GLYMA06G12380 Glycine max GLYMA06G12380 I 0.750
GLYMA08G06991 Glycine max GLYMA08G06991 I 0.729
GLYMA09G33451 Glycine max GLYMA09G33451 I 0.729
GLYMA13G09660 Glycine max GLYMA13G09660 I 0.708
GLYMA14G24590 Glycine max GLYMA14G24590 I 0.708
Gorai.002G223100 Gossypium raimondii Gorai.002G223100 I 0.771
Gorai.005G087600 Gossypium raimondii Gorai.005G087600 I 0.750
Gorai.007G043400 Gossypium raimondii Gorai.007G043400 I 0.708
Gorai.008G018100 Gossypium raimondii Gorai.008G018100 I 0.708
GRMZM2G032905 Zea mays GRMZM2G032905 I 0.729
GRMZM2G110153 Zea mays GRMZM2G110153 I 0.792
GRMZM2G130382 Zea mays GRMZM2G130382 I 0.729
GRMZM2G137387 Zea mays GRMZM2G137387 I 0.708
GRMZM2G152862 Zea mays GRMZM2G152862 I 0.750
GRMZM2G316366 Zea mays GRMZM2G316366 I 0.708
GRMZM5G805387 Zea mays GRMZM5G805387 I 0.729
GSMUA_Achr2G02660_001 Musa acuminata GSMUA_Achr2G02660_001 I 0.729
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.729
GSMUA_Achr6G18670_001 Musa acuminata GSMUA_Achr6G18670_001 I 0.917
LjSGA_047687.2 Lotus japonicus LjSGA_047687.2 I 0.708
LPERR01G34040 Leersia perrieri LPERR01G34040 I 0.792
LPERR02G04610 Leersia perrieri LPERR02G04610 I 0.729
M17_MAIZE Zea mays M17_MAIZE D 0.750
MADS2_PETHY Petunia x hybrida MADS2_PETHY D 0.750
MDP0000783966 Malus domestica MDP0000783966 I 0.708
mgf003143m Mimulus guttatus mgf003143m I 0.771
mgf006158m Mimulus guttatus mgf006158m I 0.771
mgf008207m Mimulus guttatus mgf008207m I 0.771
MLOC_65966 Hordeum vulgare MLOC_65966 I 0.708
MTR_3g088615 Medicago truncatula MTR_3g088615 I 0.729
MTR_5g031000 Medicago truncatula MTR_5g031000 I 0.708
OB01G48280 Oryza brachyantha OB01G48280 I 0.792
OB02G14670 Oryza brachyantha OB02G14670 I 0.729
OB04G22330 Oryza brachyantha OB04G22330 I 0.708
OB05G24910 Oryza brachyantha OB05G24910 I 0.771
OBART01G39540 Oryza barthii OBART01G39540 I 0.792
OBART02G05380 Oryza barthii OBART02G05380 I 0.729
OBART04G15020 Oryza barthii OBART04G15020 I 0.708
OBART05G17040 Oryza barthii OBART05G17040 I 0.792
OGLUM01G43760 Oryza glumaepatula OGLUM01G43760 I 0.792
OGLUM02G05240 Oryza glumaepatula OGLUM02G05240 I 0.729
OLONG_003010 Oryza longistaminata OLONG_003010 I 0.792
OLONG_005253 Oryza longistaminata OLONG_005253 I 0.792
OLONG_016283 Oryza longistaminata OLONG_016283 I 0.708
OMERI01G36400 Oryza meridionalis OMERI01G36400 I 0.792
OMERI02G06250 Oryza meridionalis OMERI02G06250 I 0.729
OMERI05G14780 Oryza meridionalis OMERI05G14780 I 0.792
ONIVA01G44390 Oryza nivara ONIVA01G44390 I 0.792
ONIVA02G05710 Oryza nivara ONIVA02G05710 I 0.729
ONIVA04G13150 Oryza nivara ONIVA04G13150 I 0.708
ONIVA05G17790 Oryza nivara ONIVA05G17790 I 0.792
OPUNC01G38250 Oryza punctata OPUNC01G38250 I 0.792
OPUNC02G04560 Oryza punctata OPUNC02G04560 I 0.729
orange1.1g024093m.g Citrus sinensis orange1.1g024093m.g I 0.708
ORGLA01G0334300 Oryza glaberrima ORGLA01G0334300 I 0.792
ORGLA02G0049700 Oryza glaberrima ORGLA02G0049700 I 0.729
ORGLA04G0120000 Oryza glaberrima ORGLA04G0120000 I 0.708
ORGLA05G0147400 Oryza glaberrima ORGLA05G0147400 I 0.792
ORUFI02G05500 Oryza rufipogon ORUFI02G05500 I 0.729
ORUFI04G16410 Oryza rufipogon ORUFI04G16410 I 0.708
ORUFI05G05970 Oryza rufipogon ORUFI05G05970 I 0.792
ORUFI05G18270 Oryza rufipogon ORUFI05G18270 I 0.792
MADS2 Oryza sativa OS01G0883100 D 0.792
MADS29 Oryza sativa OS02G0170300 I 0.729
OS04G0461300 Oryza sativa OS04G0461300 I 0.708
MADS4 Oryza sativa OS05G0423400 I 0.792
Pavir.Aa03173 Panicum virgatum Pavir.Aa03173 I 0.750
Pavir.Ab00475 Panicum virgatum Pavir.Ab00475 I 0.750
Pavir.Ea03625 Panicum virgatum Pavir.Ea03625 I 0.792
Pavir.Ga01454 Panicum virgatum Pavir.Ga01454 I 0.729
Pavir.Gb01527 Panicum virgatum Pavir.Gb01527 I 0.729
Pavir.J00016 Panicum virgatum Pavir.J00016 I 0.750
Pavir.J19259 Panicum virgatum Pavir.J19259 I 0.792
Pavir.J33965 Panicum virgatum Pavir.J33965 I 0.750
PDK_20s1380661g001 Phoenix dactylifera PDK_20s1380661g001 N 0.750
PGSC0003DMG401007392 Solanum tuberosum PGSC0003DMG401007392 I 0.750
PK29837.1 Cannabis sativa PK29837.1 I 0.708
Pm004718 Prunus mume Pm004718 I 0.792
POPTR_0002s07920 Populus trichocarpa POPTR_0002s07920 I 0.771
POPTR_0005s20480 Populus trichocarpa POPTR_0005s20480 I 0.750
POPTR_0015s11030 Populus trichocarpa POPTR_0015s11030 I 0.708
PRUPE_ppa012927mg Prunus persica PRUPE_ppa012927mg I 0.792
Q9AR49_MAIZE Zea mays Q9AR49_MAIZE D 0.750
Q9AVU7_MALDO Malus domestica Q9AVU7_MALDO D 0.771
Q9FVN1_MAIZE Zea mays Q9FVN1_MAIZE D 0.708
SapurV1A.0168s0400 Salix purpurea SapurV1A.0168s0400 I 0.708
SapurV1A.0829s0180 Salix purpurea SapurV1A.0829s0180 I 0.750
Sb03g041860 Sorghum bicolor Sb03g041860 I 0.812
Sb04g004736 Sorghum bicolor Sb04g004736 I 0.750
Sb06g019040 Sorghum bicolor Sb06g019040 I 0.729
Sb09g020770 Sorghum bicolor Sb09g020770 I 0.729
SELMODRAFT_450818 Selaginella moellendorffii SELMODRAFT_450818 I 0.708
SELMODRAFT_450937 Selaginella moellendorffii SELMODRAFT_450937 I 0.708
Si002929m.g Setaria italica Si002929m.g I 0.792
Si012517m.g Setaria italica Si012517m.g I 0.729
Si018183m.g Setaria italica Si018183m.g I 0.750
Si023214m.g Setaria italica Si023214m.g I 0.750
Solyc06g059970.2 Solanum lycopersicum Solyc06g059970.2 I 0.771
Solyc08g067230.2 Solanum lycopersicum Solyc08g067230.2 I 0.750
TCM_035212 Theobroma cacao TCM_035212 I 0.750
Traes_2AL_267502097 Triticum aestivum Traes_2AL_267502097 I 0.708
Traes_2BL_3E613DE21 Triticum aestivum Traes_2BL_3E613DE21 I 0.708
Traes_2DL_662837152 Triticum aestivum Traes_2DL_662837152 I 0.708
Traes_6AS_57E50EE92 Triticum aestivum Traes_6AS_57E50EE92 I 0.708
Traes_6BS_5789476CB Triticum aestivum Traes_6BS_5789476CB I 0.708
Traes_6DS_9BBDCC9F7 Triticum aestivum Traes_6DS_9BBDCC9F7 I 0.708
TRIUR3_19891 Triticum urartu TRIUR3_19891 I 0.708
TRIUR3_26896 Triticum urartu TRIUR3_26896 I 0.708
TT16 Vitis vinifera VIT_01s0011g01560 I 0.708
VIT_03s0097g00160 Vitis vinifera VIT_03s0097g00160 I 0.708
PI Vitis vinifera VIT_18s0001g01760 I 0.771