GSMUA_Achr8G07230_001 (Musa acuminata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GSMUA_Achr8G07230_001 T254403_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
A1YJE4_HORVD
M10900_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BM10_01 		0.729 0.729
MADS50
M10968_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS50_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr8P07230_001 MADS box 20 67

Links

Other MADS box family TFs
Other Musa acuminata TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.917
Pavir.Fb00782 Panicum virgatum Pavir.Fb00782 I 0.862
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.854
F775_43210 Aegilops tauschii F775_43210 I 0.854
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.854
F775_04223 Aegilops tauschii F775_04223 I 0.854
Si019951m.g Setaria italica Si019951m.g I 0.833
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.833
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.833
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.833
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.833
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.833
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.812
OS09G0116800 Oryza sativa OS09G0116800 N 0.792
OBART01G45740 Oryza barthii OBART01G45740 N 0.792
ORUFI09G00870 Oryza rufipogon ORUFI09G00870 N 0.792
OS01G0975800 Oryza sativa OS01G0975800 N 0.792
ORUFI01G49230 Oryza rufipogon ORUFI01G49230 N 0.792
LPERR02G10390 Leersia perrieri LPERR02G10390 N 0.792
ONIVA09G00960 Oryza nivara ONIVA09G00960 N 0.792
ORGLA09G0007400 Oryza glaberrima ORGLA09G0007400 N 0.792
BGIOSGA005284 Oryza indica BGIOSGA005284 N 0.792
BGIOSGA030217 Oryza indica BGIOSGA030217 N 0.792
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.792
OLONG_027660 Oryza longistaminata OLONG_027660 N 0.792
OPUNC01G44670 Oryza punctata OPUNC01G44670 N 0.792
ONIVA01G52000 Oryza nivara ONIVA01G52000 N 0.792
OMERI09G00900 Oryza meridionalis OMERI09G00900 N 0.792
OBART09G00850 Oryza barthii OBART09G00850 N 0.792
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.792
OB01G55160 Oryza brachyantha OB01G55160 N 0.792
OGLUM01G50090 Oryza glumaepatula OGLUM01G50090 N 0.792
OLONG_018222 Oryza longistaminata OLONG_018222 N 0.792
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.792
ORGLA01G0394900 Oryza glaberrima ORGLA01G0394900 N 0.792
OGLUM09G01140 Oryza glumaepatula OGLUM09G01140 N 0.792
BRADI4G39420 Brachypodium distachyon BRADI4G39420 N 0.771
LPERR01G40130 Leersia perrieri LPERR01G40130 N 0.771
Si038960m.g Setaria italica Si038960m.g N 0.750
Bra026764 Brassica rapa Bra026764 N 0.750
Aquca_015_00243 Aquilegia coerulea Aquca_015_00243 N 0.750
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.750
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.750
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.750
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.750
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N 0.750
Pavir.J13837 Panicum virgatum Pavir.J13837 I 0.729
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.729
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.729
Aquca_040_00096 Aquilegia coerulea Aquca_040_00096 N 0.729
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.729
Sb07g007373 Sorghum bicolor Sb07g007373 N 0.729
Sb07g007306 Sorghum bicolor Sb07g007306 N 0.729
Si017524m.g Setaria italica Si017524m.g I 0.729
Traes_6AL_A93C6F2FC Triticum aestivum Traes_6AL_A93C6F2FC I 0.729
Sb04g033930 Sorghum bicolor Sb04g033930 I 0.729
Traes_6DL_D8C9E421C Triticum aestivum Traes_6DL_D8C9E421C I 0.729
A1YJE4_HORVD Hordeum vulgare A1YJE4_HORVD D 0.729
ORGLA02G0288600 Oryza glaberrima ORGLA02G0288600 I 0.729
LPERR02G27330 Leersia perrieri LPERR02G27330 I 0.729
BRADI3G18670 Brachypodium distachyon BRADI3G18670 N 0.729
BRADI2G26320 Brachypodium distachyon BRADI2G26320 N 0.729
GRMZM2G459864 Zea mays GRMZM2G459864 N 0.729
GRMZM2G370777 Zea mays GRMZM2G370777 I 0.729
GRMZM2G046885 Zea mays GRMZM2G046885 I 0.729
BRADI3G58220 Brachypodium distachyon BRADI3G58220 I 0.729
Bo4g157220 Brassica oleracea Bo4g157220 N 0.729
Bra032057 Brassica rapa Bra032057 N 0.729
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.729
AGL61 Arabidopsis thaliana AT2G24840 N 0.729
TRIUR3_21732 Triticum urartu TRIUR3_21732 I 0.721
Pavir.J26790 Panicum virgatum Pavir.J26790 I 0.708
VIT_15s0048g01240 Vitis vinifera VIT_15s0048g01240 I 0.708
F775_00385 Aegilops tauschii F775_00385 I 0.708
Ca_16423 Cicer arietinum Ca_16423 I 0.708
Pm030655 Prunus mume Pm030655 I 0.708
VIT_02s0025g04650 Vitis vinifera VIT_02s0025g04650 I 0.708
TRIUR3_30872 Triticum urartu TRIUR3_30872 I 0.708
AMTR_s00025p00244880 Amborella trichopoda AMTR_s00025p00244880 N 0.708
Traes_7DS_4DF7EB08F Triticum aestivum Traes_7DS_4DF7EB08F I 0.708
SapurV1A.0578s0130 Salix purpurea SapurV1A.0578s0130 I 0.708
gw1.81.151.1 Physcomitrella patens gw1.81.151.1 N 0.708
TRIUR3_28473 Triticum urartu TRIUR3_28473 I 0.708
AMTR_s00001p00266470 Amborella trichopoda AMTR_s00001p00266470 I 0.708
gw1.88.220.1 Physcomitrella patens gw1.88.220.1 N 0.708
Gorai.005G221300 Gossypium raimondii Gorai.005G221300 I 0.708
Bra006214 Brassica rapa Bra006214 I 0.708
Gorai.008G115200 Gossypium raimondii Gorai.008G115200 I 0.708
MDP0000274606 Malus domestica MDP0000274606 N 0.708
BGIOSGA022830 Oryza indica BGIOSGA022830 N 0.708
Bo8g099550 Brassica oleracea Bo8g099550 N 0.708
Carubv10002596m.g Capsella rubella Carubv10002596m.g I 0.708
Cagra.5588s0006 Capsella grandiflora Cagra.5588s0006 I 0.708
BGIOSGA007600 Oryza indica BGIOSGA007600 N 0.708
BRADI3G41297 Brachypodium distachyon BRADI3G41297 I 0.708
BRADI1G20090 Brachypodium distachyon BRADI1G20090 N 0.708
F775_23758 Aegilops tauschii F775_23758 I 0.708
Bra007829 Brassica rapa Bra007829 N 0.708
Bo3g009340 Brassica oleracea Bo3g009340 I 0.708
Solyc08g080100.2 Solanum lycopersicum Solyc08g080100.2 I 0.708
OBART06G13310 Oryza barthii OBART06G13310 N 0.708
OGLUM02G04740 Oryza glumaepatula OGLUM02G04740 N 0.708
ORGLA06G0273400 Oryza glaberrima ORGLA06G0273400 N 0.708
ORUFI02G05030 Oryza rufipogon ORUFI02G05030 N 0.708
ORUFI03G01510 Oryza rufipogon ORUFI03G01510 I 0.708
OBART03G01800 Oryza barthii OBART03G01800 I 0.708
ORUFI06G14240 Oryza rufipogon ORUFI06G14240 N 0.708
ORGLA03G0015400 Oryza glaberrima ORGLA03G0015400 I 0.708
OGLUM03G01750 Oryza glumaepatula OGLUM03G01750 I 0.708
OMERI03G01730 Oryza meridionalis OMERI03G01730 I 0.708
ONIVA02G05120 Oryza nivara ONIVA02G05120 N 0.708
ONIVA06G15960 Oryza nivara ONIVA06G15960 N 0.708
OPUNC03G01630 Oryza punctata OPUNC03G01630 I 0.708
OLONG_015132 Oryza longistaminata OLONG_015132 N 0.708
ORGLA02G0045500 Oryza glaberrima ORGLA02G0045500 N 0.708
OLONG_010918 Oryza longistaminata OLONG_010918 I 0.708
OB06G21580 Oryza brachyantha OB06G21580 N 0.708
MADS50 Oryza sativa OS03G0122600 D 0.708
SELMODRAFT_450775 Selaginella moellendorffii SELMODRAFT_450775 N 0.708
SELMODRAFT_450772 Selaginella moellendorffii SELMODRAFT_450772 N 0.708
GSMUA_Achr8G09250_001 Musa acuminata GSMUA_Achr8G09250_001 I 0.708
SELMODRAFT_450776 Selaginella moellendorffii SELMODRAFT_450776 N 0.708
SELMODRAFT_450777 Selaginella moellendorffii SELMODRAFT_450777 N 0.708
ONIVA03G01420 Oryza nivara ONIVA03G01420 I 0.708
GRMZM2G320549 Zea mays GRMZM2G320549 I 0.708
LPERR03G01640 Leersia perrieri LPERR03G01640 I 0.708
LPERR08G18330 Leersia perrieri LPERR08G18330 I 0.708
POPTR_0014s07020 Populus trichocarpa POPTR_0014s07020 I 0.708
PGSC0003DMG400022748 Solanum tuberosum PGSC0003DMG400022748 I 0.708
OB03G11760 Oryza brachyantha OB03G11760 I 0.708
Sb01g049020 Sorghum bicolor Sb01g049020 I 0.708
Sb04g004410 Sorghum bicolor Sb04g004410 N 0.708
Sb06g015640 Sorghum bicolor Sb06g015640 N 0.708
MTR_4g102530 Medicago truncatula MTR_4g102530 I 0.708
TRAES3BF009000010CFD_g Triticum aestivum TRAES3BF009000010CFD_g I 0.708