GUITHDRAFT_40207 (Guillardia theta)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GUITHDRAFT_40207 T254426_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MEF2A
M03340_2.00
Homo sapiens
KCTAWAAATAGM

KCTATTTWTAGM
SELEX
Jolma et al.(2013)
MEF2A_1
0.729 0.729
MEF2C
M02745_2.00
Homo sapiens
TWCTAWAAATAG

CTATTTWTAGWA
SELEX
Jolma et al.(2010)
MEF2C_dimer
0.729 0.729
MEF2C
M05551_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2C_FL_HT-SELEX
0.729 0.729
MEF2C
M08149_2.00
Homo sapiens
NDDMYAAAAATAGMH

DKCTATTTTTRKHHN
ChIP-seq
Mathelier et al.(2014)
MA0497.1
0.729 0.729
MEF2A
M07979_2.00
Homo sapiens
NDDHYAAAAATARHH

DDYTATTTTTRDHHN
ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2A_HudsonAlpha
0.729 0.729
MEF2C
M07980_2.00
Homo sapiens
NDDYYAAAAATAGHH

DDCTATTTTTRRHHN
ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2C_HudsonAlpha
0.729 0.729
MEF2A
M08212_2.00
Homo sapiens
CTAWWWWTAG

CTAWWWWTAG
ChIP-seq
Contrino et al.(2012)
Mv88
0.729 0.729
MEF2A
M08213_2.00
Homo sapiens
AAAATAGM

KCTATTTT
ChIP-seq
Contrino et al.(2012)
Mv90
0.729 0.729
MEF2A
M09247_2.00
Homo sapiens
DYYAAAAATAGMH

DKCTATTTTTRRH
Misc
Kulakovskiy et al.(2013)
MEF2A_HUMAN.H11MO.0.A
0.729 0.729
MEF2C
M09248_2.00
Homo sapiens
DYYAAAAATARMH

DKYTATTTTTRRH
Misc
Kulakovskiy et al.(2013)
MEF2C_HUMAN.H11MO.0.A
0.729 0.729
Mef2a
M09255_2.00
Mus musculus
DDCYAWAAATARMH

DKYTATTTWTRGHH
Misc
Kulakovskiy et al.(2013)
MEF2A_MOUSE.H11MO.0.A
0.729 0.729
Mef2c
M09253_2.00
Mus musculus
DDMYAAAAATAGMHN

NDKCTATTTTTRKHH
Misc
Kulakovskiy et al.(2013)
MEF2C_MOUSE.H11MO.0.A
0.729 0.729
MEF2C
M09597_2.00
Homo sapiens
DHYWDAAATARM

KYTATTTHWRDH
Misc
Heinz et al.(2010)
GM12878-Mef2c_GSE32465
0.729 0.729
Mef2a
M09599_2.00
Mus musculus
CYNDAAATAG

CTATTTHNRG
Misc
Heinz et al.(2010)
HL1-Mef2a.biotin_GSE21529
0.729 0.729
MEF2A
M10933_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AMEF2_Q6
0.729 0.729
MEF2A
M10934_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMEF2_Q6
0.729 0.729
MEF2A
M10935_2.00
Homo sapiens
BTCTAAAAATAACYCY

RGRGTTATTTTTAGAV
Transfac
Matys et al.(2006)
V$MEF2_01
0.729 0.729
MEF2A
M10936_2.00
Homo sapiens
BNNNDDDCTAWAAATAGMHNNN

NNNDKCTATTTWTAGHHHNNNV
Transfac
Matys et al.(2006)
V$MEF2_02
0.729 0.729
MEF2A
M10937_2.00
Homo sapiens
NNNNDWKCTAWAAATAGMHHNN

NNDDKCTATTTWTAGMWHNNNN
Transfac
Matys et al.(2006)
V$MEF2_03
0.729 0.729
MEF2A
M10938_2.00
Homo sapiens
NVTGTTRCTAWAAATAGAAHHN

NDDWTCTATTTWTAGYAACABN
Transfac
Matys et al.(2006)
V$MEF2_04
0.729 0.729
MEF2A
M10939_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2A_05
0.729 0.729
MEF2A
M10940_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2A_Q6
0.729 0.729
MEF2C
M10945_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2C_02
0.729 0.729
MEF2C
M10946_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2C_Q4
0.729 0.729
MEF2A
M10941_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2_Q6_02
0.729 0.729
MEF2A
M10942_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MMEF2_Q6
0.729 0.729
MEF2A
M10943_2.00
Homo sapiens
NDKCTAWAAATAGMHH

DDKCTATTTWTAGMHN
Transfac
Matys et al.(2006)
V$RSRFC4_01
0.729 0.729
MEF2A
M10944_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RSRFC4_Q2
0.729 0.729
MEF2C
M05552_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2C_FL_Methyl-HT-SELEX
0.729 0.729
MEF2D
M03343_2.00
Homo sapiens
DCTAWAAATAGM

KCTATTTWTAGH
SELEX
Jolma et al.(2013)
MEF2D_1
0.708 0.708
MEF2D
M05555_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2D_eDBD_HT-SELEX
0.708 0.708
MEF2D
M09250_2.00
Homo sapiens
CTAWAAATAGMH

DKCTATTTWTAG
Misc
Kulakovskiy et al.(2013)
MEF2D_HUMAN.H11MO.0.A
0.708 0.708
Mef2d
M09252_2.00
Mus musculus
DDCTAWAAATAGMH

DKCTATTTWTAGHH
Misc
Kulakovskiy et al.(2013)
MEF2D_MOUSE.H11MO.0.A
0.708 0.708
MEF2D
M10957_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2D_Q4
0.708 0.708
MEF2D
M05556_2.00
Homo sapiens
CYWWATWWGG

CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2D_eDBD_Methyl-HT-SELEX
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKX31808 MADS box 10 57

Links

Other MADS box family TFs
Other Guillardia theta TFs

288 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action