H311_03229 (Anncaliia algerae)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 H311_03229 T254442_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
srfA
M02283_2.00
Dictyostelium discoideum
MYDWWWNNRD

HYNNWWWHRK
PBM
Weirauch et al.(2014)
pTH5539
0.729 0.729
Srf
M00178_2.00
Mus musculus
NNDDWWHHNN

NNDDWWHHNN
PBM
Badis et al.(2009)
Srf_3509
0.729 0.729
SRF
M03341_2.00
Homo sapiens
DCCWTATATGGT

ACCATATAWGGH
SELEX
Jolma et al.(2013)
SRF_1
0.729 0.729
SRF
M03342_2.00
Homo sapiens
TKHCCWTATATGGKMA

TKMCCATATAWGGDMA
SELEX
Jolma et al.(2013)
SRF_2
0.729 0.729
bs
M03915_2.00
Drosophila melanogaster
NCCWTATAWGGN

NCCWTATAWGGN
SELEX
Nitta et al.(2015)
bs_1
0.729 0.729
bs
M03916_2.00
Drosophila melanogaster
NCCWTAHAWGGH

DCCWTDTAWGGN
SELEX
Nitta et al.(2015)
bs_2
0.729 0.729
SRF
M05553_2.00
Homo sapiens
CCNTANAWGG

CCWTNTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX
0.729 0.729
SRF
M07981_2.00
Homo sapiens
NNNWDNCCAWAWAWGGNVD

HBNCCWTWTWTGGNHWNNN
ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha
0.729 0.729
SRF
M07982_2.00
Homo sapiens
CCAWATAAGGNMAD

HTKNCCTTATWTGG
ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha
0.729 0.729
SRF
M07983_2.00
Homo sapiens
NNWNNCCAWAWAWGGNVD

HBNCCWTWTWTGGNNWNN
ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha
0.729 0.729
SRF
M07984_2.00
Homo sapiens
GNCCAWATADGGHMANN

NNTKDCCHTATWTGGNC
ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha
0.729 0.729
SRF
M09249_2.00
Homo sapiens
HNWBVCCAWAWAWGGNRR

YYNCCWTWTWTGGBVWND
Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A
0.729 0.729
Srf
M09254_2.00
Mus musculus
NWDVCCAWAWAWGGVMR

YKBCCWTWTWTGGBHWN
Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A
0.729 0.729
Srf
M09598_2.00
Mus musculus
CCWWATWWGGNH

DNCCWWATWWGG
Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al.
0.729 0.729
SRF
M10947_2.00
Homo sapiens
MNBWCCWTATAWGGGCAT

ATGCCCWTATAWGGWVNK
Transfac
Matys et al.(2006)
V$SRF_01
0.729 0.729
SRF
M10948_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_02
0.729 0.729
SRF
M10949_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_03
0.729 0.729
SRF
M10950_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_09
0.729 0.729
SRF
M10951_2.00
Homo sapiens
DCCWTATAWGGVSHB

VDSBCCWTATAWGGH
Transfac
Matys et al.(2006)
V$SRF_C
0.729 0.729
SRF
M10952_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q3
0.729 0.729
SRF
M10953_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q4
0.729 0.729
SRF
M10954_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_01
0.729 0.729
SRF
M10955_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_02
0.729 0.729
SRF
M10956_2.00
Homo sapiens
BNCCAWATAWGGVN

NBCCWTATWTGGNV
Transfac
Matys et al.(2006)
V$SRF_Q6
0.729 0.729
SRF
M05554_2.00
Homo sapiens
CCNTAYAWGG

CCWTRTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX
0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KCZ75784 MADS box 87 134

Links

Other MADS box family TFs
Other Anncaliia algerae TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
srfA Dictyostelium discoideum DDB_G0281387 D 0.729
Srf Mus musculus ENSMUSG00000015605 D 0.729
bs Drosophila melanogaster FBgn0004101 D 0.729
SRF Homo sapiens ENSG00000112658 D 0.729
Pvit_03053 Pogona vitticeps Pvit_03053 I 0.729
Myotis_brandtii_SRF_10026135 Myotis brandtii Myotis_brandtii_SRF_10026135 I 0.710
Hsal_11632--XP_001120126.1_APIME Harpegnathos saltator Hsal_11632--XP_001120126.1_APIME I 0.729
Gfo_R009695 Geospiza fortis Gfo_R009695 I 0.778
ENSP00000265354 Macaca fascicularis ENSP00000265354 I 0.700
Ocbimv22020285m.g Octopus bimaculoides Ocbimv22020285m.g I 0.708
ENSBTAP00000016981-D1 Bos grunniens ENSBTAP00000016981-D1 I 0.729
Cmyd_10009988 Chelonia mydas Cmyd_10009988 I 0.724
Cflo_11261--XP_001120126.1_APIME Camponotus floridanus Cflo_11261--XP_001120126.1_APIME I 0.729
Brh_R011000 Buceros rhinoceros Brh_R011000 I 0.808
Afo_R000461 Aptenodytes forsteri Afo_R000461 I 0.778
e_gw1.1.687.1 Phycomyces blakesleeanus e_gw1.1.687.1 I 0.729
e_gw1.4.1161.1 Mucor circinelloides e_gw1.4.1161.1 I 0.729
e_gw1.6.1281.1 Mucor circinelloides e_gw1.6.1281.1 I 0.708
gw1.8.565.1 Mucor circinelloides gw1.8.565.1 I 0.729
gw1.5.917.1 Mucor circinelloides gw1.5.917.1 I 0.708
gw1.5.808.1 Sporobolomyces roseus gw1.5.808.1 I 0.750
gw1.3.516.1 Phycomyces blakesleeanus gw1.3.516.1 I 0.729
gw1.27.105.1 Phycomyces blakesleeanus gw1.27.105.1 I 0.708
fgeneshPB_pg.1__662 Phycomyces blakesleeanus fgeneshPB_pg.1__662 I 0.729
fgenesh2_pg.scaffold_8000100 Branchiostoma floridae fgenesh2_pg.scaffold_8000100 I 0.708
fgenesh2_pg.scaffold_196000035 Branchiostoma floridae fgenesh2_pg.scaffold_196000035 I 0.708
fgenesh1_kg.C_scaffold_2000029 Cochliobolus heterostrophus C5 fgenesh1_kg.C_scaffold_2000029 I 0.759
estExt_fgeneshNG_pg.C_520029 Naegleria gruberi estExt_fgeneshNG_pg.C_520029 I 0.729
estExt_fgeneshMC_pm.C_40429 Mucor circinelloides estExt_fgeneshMC_pm.C_40429 I 0.729
estExt_fgeneshDP_kg.C_1450001 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1450001 I 0.729
Aan_R005414 Calypte anna Aan_R005414 I 0.778
WBGene00243571 Onchocerca volvulus WBGene00243571 I 0.750
PGTG_07157 Puccinia graminis PGTG_07157 I 0.729
O9G_005180 Rozella allomycis O9G_005180 I 0.750
NV18787 Nasonia vitripennis NV18787 I 0.729
NEPG_02192 Nematocida parisii ertm1 NEPG_02192 I 0.750
NEMVEDRAFT_v1g164599 Nematostella vectensis NEMVEDRAFT_v1g164599 I 0.708
NCER_102270 Nosema ceranae NCER_102270 I 0.812
NBO_81g0015 Nosema bombycis NBO_81g0015 I 0.875
NBO_73g0004 Nosema bombycis NBO_73g0004 I 0.875
NBO_404g0004 Nosema bombycis NBO_404g0004 I 0.875
MVLG_06278 Microbotryum violaceum MVLG_06278 I 0.750
MVLG_04297 Microbotryum violaceum MVLG_04297 I 0.729
ML154140a Mnemiopsis leidyi ML154140a I 0.708
PHUM516920 Pediculus humanus PHUM516920 I 0.708
Ppa-unc-120 Pristionchus pacificus PPA14131 I 0.729
RHTO_04199 Rhodosporidium toruloides RHTO_04199 I 0.708
WALSEDRAFT_9958 Wallemia sebi WALSEDRAFT_9958 I 0.729
VCUG_02078 Vavraia culicis VCUG_02078 I 0.917
TriadG59812 Trichoplax adhaerens TriadG59812 I 0.708
THOM_1181 Trachipleistophora hominis THOM_1181 I 0.917
tetur02g05030 Tetranychus urticae tetur02g05030 I 0.708
TC004911 Tribolium castaneum TC004911 I 0.729
SPU_027774 Strongylocentrotus purpuratus SPU_027774 I 0.708
SNOG_07764 Phaeosphaeria nodorum SNOG_07764 I 0.759
SMAR003014 Strigamia maritima SMAR003014 I 0.708
SLOPH_1335 Spraguea lophii SLOPH_1335 I 0.896
SINV23954 Solenopsis invicta SINV23954 I 0.741
RHTO_07423 Rhodosporidium toruloides RHTO_07423 I 0.750
MESCA001358 Megaselia scalaris MESCA001358 I 0.778
TTRE_0000468501 Trichuris trichiura TTRE_0000468501 I 0.708
NBR_0001475101 Nippostrongylus brasiliensis NBR_0001475101 I 0.729
nAv.1.0.1.g08666 Acanthocheilonema viteae nAv.1.0.1.g08666 I 0.750
HPBE_0000920601 Heligmosomoides bakeri HPBE_0000920601 I 0.729
HCOI01934200 Haemonchus contortus HCOI01934200 I 0.729
GPUH_0001673101 Gongylonema pulchrum GPUH_0001673101 I 0.750
EEL_0000867301 Elaeophora elaphi EEL_0000867301 I 0.750
DME_0000010001 Dracunculus medinensis DME_0000010001 I 0.750
DICVIV_07203 Dictyocaulus viviparus DICVIV_07203 I 0.729
D918_07967 Trichuris suis D918_07967 I 0.708
D917_02561 Trichinella nativa D917_02561 I 0.708
BXY_0217000 Bursaphelenchus xylophilus BXY_0217000 I 0.724
BTMF_0000835601 Brugia timori BTMF_0000835601 I 0.750
nDi.2.2.2.g03920 Dirofilaria immitis nDi.2.2.2.g03920 I 0.750
NECAME_15797 Necator americanus NECAME_15797 I 0.729
nLs.2.1.2.g09548 Litomosoides sigmodontis nLs.2.1.2.g09548 I 0.750
TMUE_s0092001100 Trichuris muris TMUE_s0092001100 I 0.708
TELCIR_12851 Teladorsagia circumcincta TELCIR_12851 I 0.704
TCLT_0000849901 Thelazia callipaeda TCLT_0000849901 I 0.750
SVE_1017000 Strongyloides venezuelensis SVE_1017000 I 0.750
SSTP_0000932200 Strongyloides stercoralis SSTP_0000932200 I 0.750
SPAL_0000748100 Strongyloides papillosus SPAL_0000748100 I 0.750
scaffold690-EXSNAP2012.12 Pristionchus exspectatus scaffold690-EXSNAP2012.12 I 0.729
SBAD_0000850501 Soboliphyme baturini SBAD_0000850501 I 0.708
RSKR_0001102000 Rhabditophanes kr3021 RSKR_0001102000 I 0.729
PTRK_0001139200 Parastrongyloides trichosuri PTRK_0001139200 I 0.750
OESDEN_12192 Oesophagostomum dentatum OESDEN_12192 I 0.729
nOo.2.0.1.g11137 Onchocerca ochengi nOo.2.0.1.g11137 I 0.750
ASU_14961 Ascaris suum ASU_14961 I 0.750
ASU_11865 Ascaris suum ASU_11865 I 0.750
ACOM041693 Anopheles coluzzii ACOM041693 I 0.714
ACHR000964 Anopheles christyi ACHR000964 I 0.741
AATE011966 Anopheles atroparvus AATE011966 I 0.724
AARA006325 Anopheles arabiensis AARA006325 I 0.714
XP_002164692.1 Hydra magnipapillata XP_002164692.1 I 0.708
XP_002156545.1 Hydra magnipapillata XP_002156545.1 I 0.708
gw1.10.360.1 Tremella mesenterica gw1.10.360.1 I 0.729
srf.L Xenopus laevis XB-GENE-864819 I 0.729
srf Xenopus tropicalis XB-GENE-482036 I 0.729
LCUP011663 Lucilia cuprina LCUP011663 I 0.724
EFA85834.1 Polysphondylium pallidum EFA85834.1 I 0.729
CLEC013390 Cimex lectularius CLEC013390 I 0.714
ADIR000346 Anopheles dirus ADIR000346 I 0.741
AFAF013563 Anopheles farauti AFAF013563 I 0.714
AFUN006147 Anopheles funestus AFUN006147 I 0.741
ASIM_0002132201 Anisakis simplex ASIM_0002132201 I 0.750
ANCCEY_13649 Ancylostoma ceylanicum ANCCEY_13649 I 0.729
ANCCEY_11374 Ancylostoma ceylanicum ANCCEY_11374 I 0.729
ANCCAN_16750 Ancylostoma caninum ANCCAN_16750 I 0.729
ACOC_0000094701 Angiostrongylus costaricensis ACOC_0000094701 I 0.729
ACAC_0000939001 Angiostrongylus cantonensis ACAC_0000939001 I 0.729
MDOA002443 Musca domestica MDOA002443 I 0.729
BGLB003854 Biomphalaria glabrata BGLB003854 I 0.708
ASTEI07120 Anopheles stephensi ASTEI07120 I 0.741
ASIS007770 Anopheles sinensis ASIS007770 I 0.741
AQUA001308 Anopheles quadriannulatus AQUA001308 I 0.714
AMIN001258 Anopheles minimus AMIN001258 I 0.714
Sakowv30019106m.g Saccoglossus kowalevskii Sakowv30019106m.g I 0.708
SRF Macaca mulatta ENSMMUG00000000033 I 0.729
SRF Dasypus novemcinctus ENSDNOG00000014133 I 0.729
srfb Danio rerio ENSDARG00000102867 I 0.729
srfa Danio rerio ENSDARG00000053918 I 0.729
ENSCSAG00000011622 Chlorocebus sabaeus ENSCSAG00000011622 I 0.729
SRF Cavia porcellus ENSCPOG00000022327 I 0.778
SRF Callithrix jacchus ENSCJAG00000005223 I 0.729
SRF Canis familiaris ENSCAFG00000001829 I 0.729
SRF Bos taurus ENSBTAG00000012777 I 0.729
ENSAMXG00000003129 Astyanax mexicanus ENSAMXG00000003129 I 0.729
ENSAMXG00000001100 Astyanax mexicanus ENSAMXG00000001100 I 0.729
ENSAMEG00000012452 Ailuropoda melanoleuca ENSAMEG00000012452 I 0.729
SRF Equus caballus ENSECAG00000009068 I 0.729
SRF Erinaceus europaeus ENSEEUG00000005614 I 0.731
ENSFALG00000000878 Ficedula albicollis ENSFALG00000000878 I 0.778
ENSMLUG00000008828 Myotis lucifugus ENSMLUG00000008828 I 0.778
ENSMICG00000008327 Microcebus murinus ENSMICG00000008327 I 0.729
ENSLOCG00000015887 Lepisosteus oculatus ENSLOCG00000015887 I 0.729
SRF Loxodonta africana ENSLAFG00000010278 I 0.778
ENSLACG00000014404 Latimeria chalumnae ENSLACG00000014404 I 0.729
ENSGMOG00000008883 Gadus morhua ENSGMOG00000008883 I 0.729
ENSGMOG00000001540 Gadus morhua ENSGMOG00000001540 I 0.808
SRF Gorilla gorilla ENSGGOG00000006293 I 0.808
srfa Gasterosteus aculeatus ENSGACG00000020002 I 0.729
SRF Gasterosteus aculeatus ENSGACG00000003778 I 0.729
SRF Felis catus ENSFCAG00000025180 I 0.729
SRF Anolis carolinensis ENSACAG00000004798 I 0.729
EFV60876 Trichinella spiralis EFV60876 I 0.708
EDEG_01732 Edhazardia aedis EDEG_01732 I 0.875
ADAC008363 Anopheles darlingi ADAC008363 I 0.741
ACYPI002973 Acyrthosiphon pisum ACYPI002973 I 0.729
ACEP12187 Atta cephalotes ACEP12187 I 0.729
A1Q1_01509 Trichosporon asahii A1Q1_01509 I 0.711
WUBG_06152 Wuchereria bancrofti WUBG_06152 I 0.750
SPPG_06208 Spizellomyces punctatus SPPG_06208 I 0.750
SNOG_07763 Stagonospora nodorum SNOG_07763 I 0.759
RO3G_15079 Rhizopus oryzae RO3G_15079 I 0.729
RO3G_11614 Rhizopus oryzae RO3G_11614 I 0.708
RO3G_06121 Rhizopus oryzae RO3G_06121 I 0.729
RO3G_00948 Rhizopus oryzae RO3G_00948 I 0.708
Aqu1.224560 Amphimedon queenslandica Aqu1.224560 I 0.729
AWRI1499_3592 Brettanomyces bruxellensis AWRI1499_3592 I 0.759
BATDEDRAFT_7506 Batrachochytrium dendrobatidis BATDEDRAFT_7506 I 0.750
E5Q_02524 Mixia osmundae E5Q_02524 I 0.729
E5Q_01535 Mixia osmundae E5Q_01535 I 0.708
DI09_81p70 Microsporidia sp DI09_81p70 I 0.708
srfB Dictyostelium discoideum DDB_G0282835 I 0.729
DAPPUDRAFT_8703 Daphnia pulex DAPPUDRAFT_8703 I 0.708
CNN00060 Cryptococcus neoformans CNN00060 I 0.729
CHGG_06470 Chaetomium globosum CHGG_06470 I 0.708
CGI_10019446 Crassostrea gigas CGI_10019446 I 0.708
CapteG221100 Capitella teleta CapteG221100 I 0.708
Bm7708 Brugia malayi Bm7708 I 0.750
Bm3022 Brugia malayi Bm3022 I 0.750
CAOG_01457 Capsaspora owczarzaki CAOG_01457 I 0.729
SRF Monodelphis domestica ENSMODG00000018981 I 0.729
MELLADRAFT_106990 Melampsora laricipopulina MELLADRAFT_106990 I 0.729
GE14398 Drosophila yakuba FBgn0232006 I 0.729
GK22205 Drosophila willistoni FBgn0224190 I 0.729
GJ21595 Drosophila virilis FBgn0208714 I 0.729
GD11852 Drosophila simulans FBgn0183591 I 0.729
GM11854 Drosophila sechellia FBgn0166795 I 0.729
GI21322 Drosophila mojavensis FBgn0144052 I 0.729
GH20989 Drosophila grimshawi FBgn0128451 I 0.729
GG22961 Drosophila erecta FBgn0115118 I 0.729
GF11392 Drosophila ananassae FBgn0088432 I 0.729
GA17433 Drosophila pseudoobscura FBgn0077446 I 0.729
EV44_g1435 Erysiphe necator EV44_g1435 I 0.708
GB47234 Apis mellifera GB47234 I 0.729
GLOINDRAFT_82941 Rhizophagus irregularis GLOINDRAFT_82941 I 0.708
MCINX015635 Melitaea cinxia MCINX015635 I 0.714
LotgiG59850 Lottia gigantea LotgiG59850 I 0.708
LOAG_01601 Loa loa LOAG_01601 I 0.750
L804_05554 Cryptococcus gattii L804_05554 I 0.729
L798_08800 Zootermopsis nevadensis L798_08800 I 0.729
KAFR_0B05280 Kazachstania africana KAFR_0B05280 I 0.708
J056_002827 Wallemia ichthyophaga J056_002827 I 0.729
ISCW019966 Ixodes scapularis ISCW019966 I 0.708
HelroG137972 Helobdella robusta HelroG137972 I 0.708
H311_03668 Anncaliia algerae H311_03668 I 1.000
H311_00382 Anncaliia algerae H311_00382 I 0.704
GL20046 Drosophila persimilis FBgn0157643 I 0.729
ENSXMAG00000006964 Xiphophorus maculatus ENSXMAG00000006964 I 0.729
ENSMPUG00000013090 Mustela putorius furo ENSMPUG00000013090 I 0.729
SRF Pan troglodytes ENSPTRG00000018189 I 0.729
ENSPPYG00000016633 Pongo abelii ENSPPYG00000016633 I 0.729
ENSPFOG00000022718 Poecilia formosa ENSPFOG00000022718 I 0.729
ENSPFOG00000018770 Poecilia formosa ENSPFOG00000018770 I 0.750
ENSPANG00000006410 Papio anubis ENSPANG00000006410 I 0.729
SRF Oryzias latipes ENSORLG00000013036 I 0.729
ENSOPRG00000002509 Ochotona princeps ENSOPRG00000002509 I 0.808
ENSONIG00000010505 Oreochromis niloticus ENSONIG00000010505 I 0.729
ENSONIG00000010161 Oreochromis niloticus ENSONIG00000010161 I 0.729
SRF Otolemur garnettii ENSOGAG00000029623 I 0.729
SRF Oryctolagus cuniculus ENSOCUG00000002892 I 0.729
ENSOARG00000005757 Ovis aries ENSOARG00000005757 I 0.750
ENSNLEG00000004203 Nomascus leucogenys ENSNLEG00000004203 I 0.729
SRF Pteropus vampyrus ENSPVAG00000008728 I 0.729
Srf Rattus norvegicus ENSRNOG00000018232 I 0.729
SRF Vicugna pacos ENSVPAG00000008912 I 0.808
SRF Tursiops truncatus ENSTTRG00000007017 I 0.729
SRF Takifugu rubripes ENSTRUG00000017531 I 0.729
srfa Takifugu rubripes ENSTRUG00000011448 I 0.729
SRF Tetraodon nigroviridis ENSTNIG00000013420 I 0.729
srfa Tetraodon nigroviridis ENSTNIG00000002923 I 0.729
SRF Taeniopygia guttata ENSTGUG00000004738 I 0.778
ENSSTOG00000014222 Ictidomys tridecemlineatus ENSSTOG00000014222 I 0.729
SRF Sus scrofa ENSSSCG00000001661 I 0.729
SRF Sorex araneus ENSSARG00000003401 I 0.731
EROM_071660 Encephalitozoon romaleae EROM_071660 N 0.833
CAD25705 Encephalitozoon cuniculi CAD25705 N 0.854
M896_081720 Ordospora colligata M896_081720 N 0.833
EHEL_071720 Encephalitozoon hellem EHEL_071720 N 0.833
Eint_071710 Encephalitozoon intestinalis Eint_071710 N 0.854