KGM_22252 (Danaus plexippus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 KGM_22252 T254489_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bs
M03915_2.00 		Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN		 SELEX
Nitta et al.(2015)
bs_1 		0.917 0.917
bs
M03916_2.00 		Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN		 SELEX
Nitta et al.(2015)
bs_2 		0.917 0.917
Srf
M00178_2.00 		Mus musculus
NNDDWWHHNN
NNDDWWHHNN		 PBM
Badis et al.(2009)
Srf_3509 		0.875 0.875
unc-120
M00684_2.00 		Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG		 PBM
Narasimhan et al.(2015)
pTH10822 		0.875 0.875
SRF
M03341_2.00 		Homo sapiens
DCCWTATATGGT
ACCATATAWGGH		 SELEX
Jolma et al.(2013)
SRF_1 		0.875 0.875
SRF
M03342_2.00 		Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA		 SELEX
Jolma et al.(2013)
SRF_2 		0.875 0.875
SRF
M05553_2.00 		Homo sapiens
CCNTANAWGG
CCWTNTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX 		0.875 0.875
SRF
M07981_2.00 		Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha 		0.875 0.875
SRF
M07982_2.00 		Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha 		0.875 0.875
SRF
M07983_2.00 		Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN		 ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha 		0.875 0.875
SRF
M07984_2.00 		Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC		 ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha 		0.875 0.875
SRF
M09249_2.00 		Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND		 Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A 		0.875 0.875
Srf
M09254_2.00 		Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN		 Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A 		0.875 0.875
Srf
M09598_2.00 		Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG		 Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al. 		0.875 0.875
SRF
M10947_2.00 		Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK		 Transfac
Matys et al.(2006)
V$SRF_01 		0.875 0.875
SRF
M10948_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_02 		0.875 0.875
SRF
M10949_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_03 		0.875 0.875
SRF
M10950_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_09 		0.875 0.875
SRF
M10951_2.00 		Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH		 Transfac
Matys et al.(2006)
V$SRF_C 		0.875 0.875
SRF
M10952_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q3 		0.875 0.875
SRF
M10953_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q4 		0.875 0.875
SRF
M10954_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_01 		0.875 0.875
SRF
M10955_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SRF_Q5_02 		0.875 0.875
SRF
M10956_2.00 		Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV		 Transfac
Matys et al.(2006)
V$SRF_Q6 		0.875 0.875
SRF
M05554_2.00 		Homo sapiens
CCNTAYAWGG
CCWTRTANGG		 SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX 		0.875 0.875
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EHJ63648 MADS box 114 137

Links

Other MADS box family TFs
Other Danaus plexippus TFs

166 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMEL017831 Heliconius melpomene HMEL017831 I 1.000
AATE005744 Anopheles atroparvus AATE005744 I 0.958
ACHR006794 Anopheles christyi ACHR006794 I 0.958
AMAM005702 Anopheles maculatus AMAM005702 I 0.958
ACUA001543 Anopheles culicifacies ACUA001543 I 0.958
HHAL001484-PA Halyomorpha halys HHAL001484-PA I 0.958
MESCA004860 Megaselia scalaris MESCA004860 I 0.958
PPAI006358 Phlebotomus papatasi PPAI006358 I 0.958
SINV23963 Solenopsis invicta SINV23963 I 0.958
CLEC013393 Cimex lectularius CLEC013393 I 0.958
CPIJ016459 Culex quinquefasciatus CPIJ016459 I 0.957
AARA006326 Anopheles arabiensis AARA006326 I 0.957
ACOM041695 Anopheles coluzzii ACOM041695 I 0.957
AMEC009624 Anopheles melas AMEC009624 I 0.957
AQUA001309 Anopheles quadriannulatus AQUA001309 I 0.957
AGAP010511 Anopheles gambiae AGAP010511 I 0.957
CpipJ_CPIJ016459 Culex pipiens CpipJ_CPIJ016459 I 0.957
GJ21595 Drosophila virilis FBgn0208714 I 0.917
bs Drosophila melanogaster FBgn0004101 D 0.917
GK22205 Drosophila willistoni FBgn0224190 I 0.917
ENSXMAG00000018559 Xiphophorus maculatus ENSXMAG00000018559 I 0.917
CpipJ_CPIJ008336 Culex pipiens CpipJ_CPIJ008336 I 0.917
GE14398 Drosophila yakuba FBgn0232006 I 0.917
GM11854 Drosophila sechellia FBgn0166795 I 0.917
GG22961 Drosophila erecta FBgn0115118 I 0.917
GH20989 Drosophila grimshawi FBgn0128451 I 0.917
GF11392 Drosophila ananassae FBgn0088432 I 0.917
GA17433 Drosophila pseudoobscura FBgn0077446 I 0.917
GI21322 Drosophila mojavensis FBgn0144052 I 0.917
GL20046 Drosophila persimilis FBgn0157643 I 0.917
GD11852 Drosophila simulans FBgn0183591 I 0.917
LCUP011662 Lucilia cuprina LCUP011662 I 0.917
AFAF006302 Anopheles farauti AFAF006302 I 0.917
AEPI007009 Anopheles epiroticus AEPI007009 I 0.917
AFUN006149 Anopheles funestus AFUN006149 I 0.917
AMIN001256 Anopheles minimus AMIN001256 I 0.917
MDOA002443 Musca domestica MDOA002443 I 0.917
ASTEI07121 Anopheles stephensi ASTEI07121 I 0.917
ADIR000345 Anopheles dirus ADIR000345 N 0.917
AALB009947 Anopheles albimanus AALB009947 I 0.917
Cflo_11261--XP_001120126.1_APIME Camponotus floridanus Cflo_11261--XP_001120126.1_APIME I 0.917
NV18787 Nasonia vitripennis NV18787 I 0.917
Hsal_11632--XP_001120126.1_APIME Harpegnathos saltator Hsal_11632--XP_001120126.1_APIME I 0.917
SRF Oryzias latipes ENSORLG00000013036 I 0.917
LDEC007646 Leptinotarsa decemlineata LDEC007646 I 0.917
L798_08800 Zootermopsis nevadensis L798_08800 I 0.917
GB47234 Apis mellifera GB47234 I 0.917
CPIJ008336 Culex quinquefasciatus CPIJ008336 I 0.917
ACEP12187 Atta cephalotes ACEP12187 I 0.917
BGIBMGA001382 Bombyx mori BGIBMGA001382 I 0.917
CJA08385 Caenorhabditis japonica CJA08385 I 0.875
TTRE_0000468501 Trichuris trichiura TTRE_0000468501 I 0.875
DAPPUDRAFT_8703 Daphnia pulex DAPPUDRAFT_8703 I 0.875
EFV60876 Trichinella spiralis EFV60876 I 0.875
Bm7708 Brugia malayi Bm7708 I 0.875
Bm3022 Brugia malayi Bm3022 I 0.875
TMUE_s0092001100 Trichuris muris TMUE_s0092001100 I 0.875
ACYPI002973 Acyrthosiphon pisum ACYPI002973 I 0.875
SRF Anolis carolinensis ENSACAG00000004798 I 0.875
WUBG_06152 Wuchereria bancrofti WUBG_06152 I 0.875
ENSAMEG00000012452 Ailuropoda melanoleuca ENSAMEG00000012452 I 0.875
fgenesh2_pg.scaffold_8000100 Branchiostoma floridae fgenesh2_pg.scaffold_8000100 I 0.875
Sakowv30019106m.g Saccoglossus kowalevskii Sakowv30019106m.g I 0.875
SRF Oryctolagus cuniculus ENSOCUG00000002892 I 0.875
Pvit_03053 Pogona vitticeps Pvit_03053 I 0.875
SRF Choloepus hoffmanni ENSCHOG00000008671 I 0.875
SRF Canis familiaris ENSCAFG00000001829 I 0.875
SRF Bos taurus ENSBTAG00000012777 I 0.875
srf.L Xenopus laevis XB-GENE-864819 I 0.875
srf Xenopus tropicalis XB-GENE-482036 I 0.875
ENSAMXG00000001100 Astyanax mexicanus ENSAMXG00000001100 I 0.875
ENSAMXG00000003129 Astyanax mexicanus ENSAMXG00000003129 I 0.875
ALUE_0001693901 Ascaris lumbricoides ALUE_0001693901 I 0.875
ANCDUO_13359 Ancylostoma duodenale ANCDUO_13359 I 0.875
PTRK_0001139200 Parastrongyloides trichosuri PTRK_0001139200 I 0.875
RSKR_0001102000 Rhabditophanes kr3021 RSKR_0001102000 I 0.875
OFLC_0001346401 Onchocerca flexuosa OFLC_0001346401 I 0.875
nOo.2.0.1.g11137 Onchocerca ochengi nOo.2.0.1.g11137 I 0.875
nLs.2.1.2.g09548 Litomosoides sigmodontis nLs.2.1.2.g09548 I 0.875
SBAD_0000850501 Soboliphyme baturini SBAD_0000850501 I 0.875
scaffold2825-EXSNAP2012.1 Pristionchus exspectatus scaffold2825-EXSNAP2012.1 I 0.875
SSTP_0000932200 Strongyloides stercoralis SSTP_0000932200 I 0.875
SVE_1017000 Strongyloides venezuelensis SVE_1017000 I 0.875
SPAL_0000748100 Strongyloides papillosus SPAL_0000748100 I 0.875
snap_masked-nMf.1.1.scaf02542-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf02542-processed-gene-0.2 N 0.875
scaffold690-EXSNAP2012.12 Pristionchus exspectatus scaffold690-EXSNAP2012.12 I 0.875
nDi.2.2.2.g03920 Dirofilaria immitis nDi.2.2.2.g03920 I 0.875
nAv.1.0.1.g08666 Acanthocheilonema viteae nAv.1.0.1.g08666 I 0.875
ASU_14961 Ascaris suum ASU_14961 I 0.875
BTMF_0000835601 Brugia timori BTMF_0000835601 I 0.875
ASU_11865 Ascaris suum ASU_11865 I 0.875
ASIM_0002132201 Anisakis simplex ASIM_0002132201 I 0.875
ANCDUO_18278 Ancylostoma duodenale ANCDUO_18278 I 0.875
D917_02561 Trichinella nativa D917_02561 I 0.875
D918_07967 Trichuris suis D918_07967 I 0.875
GPUH_0001673101 Gongylonema pulchrum GPUH_0001673101 I 0.875
EVEC_0001294401 Enterobius vermicularis EVEC_0001294401 N 0.875
EEL_0000867301 Elaeophora elaphi EEL_0000867301 I 0.875
DME_0000010001 Dracunculus medinensis DME_0000010001 I 0.875
ENSBTAP00000016981-D1 Bos grunniens ENSBTAP00000016981-D1 I 0.875
fgenesh2_pg.scaffold_196000035 Branchiostoma floridae fgenesh2_pg.scaffold_196000035 I 0.875
SRF Tursiops truncatus ENSTTRG00000007017 I 0.875
ENSXMAG00000006964 Xiphophorus maculatus ENSXMAG00000006964 I 0.875
SRF Takifugu rubripes ENSTRUG00000017531 I 0.875
srfa Takifugu rubripes ENSTRUG00000011448 I 0.875
SRF Tetraodon nigroviridis ENSTNIG00000013420 I 0.875
Srf Mus musculus ENSMUSG00000015605 D 0.875
ENSMPUG00000013090 Mustela putorius furo ENSMPUG00000013090 I 0.875
ENSLOCG00000015887 Lepisosteus oculatus ENSLOCG00000015887 I 0.875
ENSGMOG00000008883 Gadus morhua ENSGMOG00000008883 I 0.875
ENSMICG00000008327 Microcebus murinus ENSMICG00000008327 I 0.875
SRF Macaca mulatta ENSMMUG00000000033 I 0.875
SRF Monodelphis domestica ENSMODG00000018981 I 0.875
srfa Tetraodon nigroviridis ENSTNIG00000002923 I 0.875
ENSSTOG00000014222 Ictidomys tridecemlineatus ENSSTOG00000014222 I 0.875
ENSNLEG00000004203 Nomascus leucogenys ENSNLEG00000004203 I 0.875
ENSPANG00000006410 Papio anubis ENSPANG00000006410 I 0.875
ENSONIG00000010505 Oreochromis niloticus ENSONIG00000010505 I 0.875
ENSONIG00000010161 Oreochromis niloticus ENSONIG00000010161 I 0.875
SRF Otolemur garnettii ENSOGAG00000029623 I 0.875
ENSPFOG00000018770 Poecilia formosa ENSPFOG00000018770 I 0.875
ENSPFOG00000022718 Poecilia formosa ENSPFOG00000022718 I 0.875
Srf Rattus norvegicus ENSRNOG00000018232 I 0.875
SRF Sus scrofa ENSSSCG00000001661 I 0.875
SRF Pteropus vampyrus ENSPVAG00000008728 I 0.875
SRF Pan troglodytes ENSPTRG00000018189 I 0.875
ENSPPYG00000016633 Pongo abelii ENSPPYG00000016633 I 0.875
srfa Gasterosteus aculeatus ENSGACG00000020002 I 0.875
ENSLACG00000014404 Latimeria chalumnae ENSLACG00000014404 I 0.875
ISCW019966 Ixodes scapularis ISCW019966 I 0.875
srfb Danio rerio ENSDARG00000102867 I 0.875
SMAR003014 Strigamia maritima SMAR003014 I 0.875
srfa Danio rerio ENSDARG00000053918 I 0.875
SRF Callithrix jacchus ENSCJAG00000005223 I 0.875
ENSCSAG00000011622 Chlorocebus sabaeus ENSCSAG00000011622 I 0.875
Ppa-unc-120 Pristionchus pacificus PPA14131 I 0.875
LOAG_01601 Loa loa LOAG_01601 I 0.875
TC004911 Tribolium castaneum TC004911 I 0.875
WBGene00243571 Onchocerca volvulus WBGene00243571 I 0.875
YQE_03076 Dendroctonus ponderosae YQE_03076 I 0.875
SRF Gasterosteus aculeatus ENSGACG00000003778 I 0.875
SRF Homo sapiens ENSG00000112658 D 0.875
SRF Felis catus ENSFCAG00000025180 I 0.875
SRF Dasypus novemcinctus ENSDNOG00000014133 I 0.875
SRF Equus caballus ENSECAG00000009068 I 0.875
TCLT_0000849901 Thelazia callipaeda TCLT_0000849901 I 0.875
RPRC001752 Rhodnius prolixus RPRC001752 I 0.852
ENSCSAVG00000008682 Ciona savignyi ENSCSAVG00000008682 I 0.833
SPU_027774 Strongylocentrotus purpuratus SPU_027774 I 0.833
LotgiG59850 Lottia gigantea LotgiG59850 I 0.833
L889_g24087 Steinernema feltiae L889_g24087 I 0.833
L898_g9834 Steinernema monticolum L898_g9834 I 0.833
CGI_10019446 Crassostrea gigas CGI_10019446 I 0.833
CapteG221100 Capitella teleta CapteG221100 I 0.833
AAEL010925 Aedes aegypti AAEL010925 I 0.833
L596_g5274 Steinernema carpocapsae L596_g5274 I 0.833
L892_g14520 Steinernema scapterisci L892_g14520 I 0.833
BGLB003854 Biomphalaria glabrata BGLB003854 I 0.833
L893_g14743 Steinernema glaseri L893_g14743 I 0.833
srf Ciona intestinalis ENSCING00000018042 I 0.792
HelroG137972 Helobdella robusta HelroG137972 I 0.750
SRF Procavia capensis ENSPCAG00000009376 I 0.750
tetur02g05030 Tetranychus urticae tetur02g05030 I 0.750
GLOINDRAFT_82941 Rhizophagus irregularis GLOINDRAFT_82941 I 0.708
RO3G_00948 Rhizopus oryzae RO3G_00948 I 0.708
SPPG_06208 Spizellomyces punctatus SPPG_06208 I 0.708