LELG_04554 (Lodderomyces elongisporus)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 LELG_04554 T254513_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SMP1
M01557_2.00
Saccharomyces cerevisiae
TTAATAAA

TTTATTAA
PBM
Zhu et al.(2009)
Smp1
0.708 0.708
SMP1
M08587_2.00
Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN

NNBWNNYWYAATTRWRKVHNV
Misc
DeBoer et al.(2011)
YBR182C_864
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EDK46373 MADS box 10 57

Links

Other MADS box family TFs
Other Lodderomyces elongisporus TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_27077 Aegilops tauschii F775_27077 I 0.000
F775_18043 Aegilops tauschii F775_18043 I 0.000
F775_23690 Aegilops tauschii F775_23690 I 0.000
F775_26024 Aegilops tauschii F775_26024 I 0.000
AMTR_s00001p00272270 Amborella trichopoda AMTR_s00001p00272270 I 0.000
AMTR_s00044p00072910 Amborella trichopoda AMTR_s00044p00072910 I 0.000
Aquca_002_01329 Aquilegia coerulea Aquca_002_01329 I 0.000
fgenesh2_kg.1__2004__AT1G18330.2 Arabidopsis lyrata fgenesh2_kg.1__2004__AT1G18330.2 I 0.000
RVE1 Arabidopsis lyrata fgenesh2_kg.6__1729__AT5G17300.1 I 0.000
RVE2 Arabidopsis lyrata fgenesh2_kg.7__3122__AT5G37260.1 I 0.000
CCA1 Arabidopsis lyrata scaffold_403655.1 I 0.000
RVE7L Arabidopsis thaliana AT3G10113 D 0.000
LHY Arabidopsis thaliana AT1G01060 D 0.000
RVE7 Arabidopsis thaliana AT1G18330 D 0.000
CCA1 Arabidopsis thaliana AT2G46830 D 0.000
RVE2 Arabidopsis thaliana AT5G37260 I 0.000
RVE1 Arabidopsis thaliana AT5G17300 D 0.000
Bostr.5325s0026 Boechera stricta Bostr.5325s0026 I 0.000
Bostr.2618s0066 Boechera stricta Bostr.2618s0066 I 0.000
Bostr.9638s0043 Boechera stricta Bostr.9638s0043 I 0.000
Bostr.7128s0434 Boechera stricta Bostr.7128s0434 I 0.000
BRADI5G19380 Brachypodium distachyon BRADI5G19380 I 0.000
BRADI3G16515 Brachypodium distachyon BRADI3G16515 I 0.000
BRADI3G51960 Brachypodium distachyon BRADI3G51960 I 0.000
BRADI1G29680 Brachypodium distachyon BRADI1G29680 I 0.000
Bo3g012470 Brassica oleracea Bo3g012470 I 0.000
Bo5g002760 Brassica oleracea Bo5g002760 I 0.000
Bo2g013560 Brassica oleracea Bo2g013560 I 0.000
Bo3g001090 Brassica oleracea Bo3g001090 I 0.000
Bo6g057640 Brassica oleracea Bo6g057640 I 0.000
Bo4g006930 Brassica oleracea Bo4g006930 I 0.000
Bo5g025310 Brassica oleracea Bo5g025310 I 0.000
Bo9g161410 Brassica oleracea Bo9g161410 I 0.000
Bra033291 Brassica rapa Bra033291 I 0.000
Bra004503 Brassica rapa Bra004503 I 0.000
Bra006394 Brassica rapa Bra006394 I 0.000
Bra008563 Brassica rapa Bra008563 I 0.000
Bra023610 Brassica rapa Bra023610 I 0.000
Bra025914 Brassica rapa Bra025914 I 0.000
Bra030496 Brassica rapa Bra030496 I 0.000
Bra039503 Brassica rapa Bra039503 I 0.000
PK08316.1 Cannabis sativa PK08316.1 D 0.000
PK28456.1 Cannabis sativa PK28456.1 I 0.000
PK20866.1 Cannabis sativa PK20866.1 I 0.000
Cagra.25009s0002 Capsella grandiflora Cagra.25009s0002 I 0.000
Cagra.4849s0004 Capsella grandiflora Cagra.4849s0004 I 0.000
Cagra.0050s0017 Capsella grandiflora Cagra.0050s0017 I 0.000
Cagra.0909s0012 Capsella grandiflora Cagra.0909s0012 I 0.000
Cagra.1968s0051 Capsella grandiflora Cagra.1968s0051 I 0.000
Carubv10001147m.g Capsella rubella Carubv10001147m.g I 0.000
Carubv10009624m.g Capsella rubella Carubv10009624m.g I 0.000
Carubv10008551m.g Capsella rubella Carubv10008551m.g I 0.000
Carubv10005376m.g Capsella rubella Carubv10005376m.g I 0.000
Carubv10022831m.g Capsella rubella Carubv10022831m.g I 0.000
evm.TU.supercontig_178.22 Carica papaya evm.TU.supercontig_178.22 I 0.000
evm.TU.supercontig_1055.1 Carica papaya evm.TU.supercontig_1055.1 I 0.000
evm.TU.supercontig_7.134 Carica papaya evm.TU.supercontig_7.134 I 0.000
CHLREDRAFT_123164 Chlamydomonas reinhardtii CHLREDRAFT_123164 I 0.000
fgeneshCV_pg.C_scaffold_1000277 Chlorella vulgaris fgeneshCV_pg.C_scaffold_1000277 I 0.000
Ca_18030 Cicer arietinum Ca_18030 I 0.000
Ca_14385 Cicer arietinum Ca_14385 I 0.000
Cla018914 Citrullus lanatus Cla018914 I 0.000
Cla009284 Citrullus lanatus Cla009284 I 0.000
Ciclev10011554m.g Citrus clementina Ciclev10011554m.g I 0.000
Ciclev10020130m.g Citrus clementina Ciclev10020130m.g I 0.000
Ciclev10018964m.g Citrus clementina Ciclev10018964m.g I 0.000
orange1.1g012625m.g Citrus sinensis orange1.1g012625m.g I 0.000
orange1.1g004262m.g Citrus sinensis orange1.1g004262m.g I 0.000
orange1.1g021851m.g Citrus sinensis orange1.1g021851m.g I 0.000
Genemark1.422_g Coccomyxa subellipsoidea C169 Genemark1.422_g I 0.000
Cucsa.112530 Cucumis sativus Cucsa.112530 I 0.000
Cucsa.278220 Cucumis sativus Cucsa.278220 I 0.000
Cucsa.349800 Cucumis sativus Cucsa.349800 I 0.000
Eucgr.K02302 Eucalyptus grandis Eucgr.K02302 I 0.000
Eucgr.D02651 Eucalyptus grandis Eucgr.D02651 I 0.000
Eucgr.F02906 Eucalyptus grandis Eucgr.F02906 I 0.000
Thhalv10008035m.g Eutrema salsugineum Thhalv10008035m.g I 0.000
Thhalv10013821m.g Eutrema salsugineum Thhalv10013821m.g I 0.000
Thhalv10028153m.g Eutrema salsugineum Thhalv10028153m.g I 0.000
Thhalv10007028m.g Eutrema salsugineum Thhalv10007028m.g I 0.000
gene09296-v1.0-hybrid Fragaria vesca gene09296-v1.0-hybrid I 0.000
GLYMA07G05410 Glycine max GLYMA07G05410 I 0.000
GLYMA18G05050 Glycine max GLYMA18G05050 I 0.000
GLYMA16G34340 Glycine max GLYMA16G34340 I 0.000
GLYMA16G01980 Glycine max GLYMA16G01980 I 0.000
GLYMA19G45030 Glycine max GLYMA19G45030 I 0.000
GLYMA02G40800 Glycine max GLYMA02G40800 I 0.000
GLYMA11G33180 Glycine max GLYMA11G33180 I 0.000
GLYMA03G42260 Glycine max GLYMA03G42260 I 0.000
GLYMA09G29800 Glycine max GLYMA09G29800 I 0.000
GLYMA14G39130 Glycine max GLYMA14G39130 I 0.000
Gorai.008G293600 Gossypium raimondii Gorai.008G293600 I 0.000
Gorai.001G069700 Gossypium raimondii Gorai.001G069700 I 0.000
Gorai.008G132000 Gossypium raimondii Gorai.008G132000 I 0.000
Gorai.008G131800 Gossypium raimondii Gorai.008G131800 I 0.000
Gorai.007G113900 Gossypium raimondii Gorai.007G113900 I 0.000
MLOC_62877 Hordeum vulgare MLOC_62877 I 0.000
MLOC_14118 Hordeum vulgare MLOC_14118 I 0.000
MLOC_57684 Hordeum vulgare MLOC_57684 I 0.000
LPERR02G22990 Leersia perrieri LPERR02G22990 I 0.000
LPERR04G18770 Leersia perrieri LPERR04G18770 I 0.000
LPERR06G23620 Leersia perrieri LPERR06G23620 I 0.000
LPERR08G03480 Leersia perrieri LPERR08G03480 I 0.000
Lus10005134.g Linum usitatissimum Lus10005134.g I 0.000
Lus10031322.g Linum usitatissimum Lus10031322.g I 0.000
Lus10031893.g Linum usitatissimum Lus10031893.g I 0.000
Lus10042292.g Linum usitatissimum Lus10042292.g I 0.000
Lus10010100.g Linum usitatissimum Lus10010100.g I 0.000
Lus10030184.g Linum usitatissimum Lus10030184.g I 0.000
Lus10026365.g Linum usitatissimum Lus10026365.g I 0.000
LjSGA_026437.1 Lotus japonicus LjSGA_026437.1 I 0.000
chr3.CM0208.410.nd Lotus japonicus chr3.CM0208.410.nd I 0.000
MDP0000187927 Malus domestica MDP0000187927 I 0.000
MDP0000795432 Malus domestica MDP0000795432 I 0.000
MDP0000193097 Malus domestica MDP0000193097 I 0.000
MDP0000581293 Malus domestica MDP0000581293 I 0.000
cassava36126.valid.m1 Manihot esculenta cassava36126.valid.m1 I 0.000
cassava33517.m1 Manihot esculenta cassava33517.m1 I 0.000
cassava35529.valid.m1 Manihot esculenta cassava35529.valid.m1 I 0.000
cassava35530.valid.m1 Manihot esculenta cassava35530.valid.m1 I 0.000
cassava35531.valid.m1 Manihot esculenta cassava35531.valid.m1 I 0.000
MTR_3g064500 Medicago truncatula MTR_3g064500 I 0.000
MTR_5g076960 Medicago truncatula MTR_5g076960 I 0.000
MTR_6g477860 Medicago truncatula MTR_6g477860 I 0.000
MTR_7g118330 Medicago truncatula MTR_7g118330 I 0.000
EuGene.0000110367 Micromonas pusilla EuGene.0000110367 I 0.000
estExt_fgenesh2_pg.C_Chr_080053 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_080053 I 0.000
mgf014004m Mimulus guttatus mgf014004m I 0.000
mgf001364m Mimulus guttatus mgf001364m I 0.000
mgf011909m Mimulus guttatus mgf011909m I 0.000
mgf021826m Mimulus guttatus mgf021826m I 0.000
GSMUA_AchrUn_randomG03000_001 Musa acuminata GSMUA_AchrUn_randomG03000_001 I 0.000
GSMUA_Achr8G13440_001 Musa acuminata GSMUA_Achr8G13440_001 I 0.000
GSMUA_Achr1G06360_001 Musa acuminata GSMUA_Achr1G06360_001 I 0.000
GSMUA_AchrUn_randomG02340_001 Musa acuminata GSMUA_AchrUn_randomG02340_001 I 0.000
GSMUA_Achr10G06560_001 Musa acuminata GSMUA_Achr10G06560_001 I 0.000
GSMUA_Achr11G01420_001 Musa acuminata GSMUA_Achr11G01420_001 I 0.000
OBART02G28240 Oryza barthii OBART02G28240 I 0.000
OBART06G28140 Oryza barthii OBART06G28140 I 0.000
OBART04G23030 Oryza barthii OBART04G23030 I 0.000
OB02G35470 Oryza brachyantha OB02G35470 I 0.000
OB04G29880 Oryza brachyantha OB04G29880 I 0.000
OB06G35920 Oryza brachyantha OB06G35920 I 0.000
OB08G13700 Oryza brachyantha OB08G13700 I 0.000
ORGLA02G0242600 Oryza glaberrima ORGLA02G0242600 I 0.000
ORGLA08G0028700 Oryza glaberrima ORGLA08G0028700 I 0.000
ORGLA06G0287300 Oryza glaberrima ORGLA06G0287300 I 0.000
OGLUM04G22920 Oryza glumaepatula OGLUM04G22920 I 0.000
OGLUM06G29530 Oryza glumaepatula OGLUM06G29530 I 0.000
OGLUM08G03510 Oryza glumaepatula OGLUM08G03510 I 0.000
OGLUM02G28780 Oryza glumaepatula OGLUM02G28780 I 0.000
BGIOSGA028019 Oryza indica BGIOSGA028019 I 0.000
BGIOSGA020501 Oryza indica BGIOSGA020501 I 0.000
BGIOSGA014483 Oryza indica BGIOSGA014483 I 0.000
BGIOSGA005828 Oryza indica BGIOSGA005828 I 0.000
OLONG_007470 Oryza longistaminata OLONG_007470 I 0.000
OLONG_000103 Oryza longistaminata OLONG_000103 I 0.000
OLONG_010266 Oryza longistaminata OLONG_010266 I 0.000
OLONG_003280 Oryza longistaminata OLONG_003280 I 0.000
OMERI02G27330 Oryza meridionalis OMERI02G27330 I 0.000
OMERI08G03470 Oryza meridionalis OMERI08G03470 I 0.000
OMERI06G28070 Oryza meridionalis OMERI06G28070 I 0.000
OMERI04G19240 Oryza meridionalis OMERI04G19240 I 0.000
ONIVA04G22180 Oryza nivara ONIVA04G22180 I 0.000
ONIVA06G31120 Oryza nivara ONIVA06G31120 I 0.000
ONIVA09G03730 Oryza nivara ONIVA09G03730 I 0.000
ONIVA08G03410 Oryza nivara ONIVA08G03410 I 0.000
OPUNC06G25680 Oryza punctata OPUNC06G25680 I 0.000
OPUNC08G03280 Oryza punctata OPUNC08G03280 I 0.000
OPUNC02G25920 Oryza punctata OPUNC02G25920 I 0.000
OPUNC04G20560 Oryza punctata OPUNC04G20560 I 0.000
ORUFI06G30080 Oryza rufipogon ORUFI06G30080 I 0.000
ORUFI02G29720 Oryza rufipogon ORUFI02G29720 I 0.000
ORUFI04G24740 Oryza rufipogon ORUFI04G24740 I 0.000
OS08G0157600 Oryza sativa OS08G0157600 D 0.000
OS06G0728700 Oryza sativa OS06G0728700 I 0.000
OS02G0685200 Oryza sativa OS02G0685200 I 0.000
OS04G0583900 Oryza sativa OS04G0583900 I 0.000
OSTLU_5960 Ostreococcus lucimarinus OSTLU_5960 I 0.000
gw1.6.1363.1 Ostreococcus RCC809 gw1.6.1363.1 I 0.000
Pavir.J34894 Panicum virgatum Pavir.J34894 I 0.000
Pavir.J10427 Panicum virgatum Pavir.J10427 I 0.000
Pavir.J00602 Panicum virgatum Pavir.J00602 I 0.000
Pavir.Fa01905 Panicum virgatum Pavir.Fa01905 I 0.000
Pavir.Gb00859 Panicum virgatum Pavir.Gb00859 I 0.000
Pavir.Db00044 Panicum virgatum Pavir.Db00044 I 0.000
Pavir.Aa00960 Panicum virgatum Pavir.Aa00960 I 0.000
Pavir.Ab02717 Panicum virgatum Pavir.Ab02717 I 0.000
PDK_20s1315421g001 Phoenix dactylifera PDK_20s1315421g001 I 0.000
PDK_20s1414244g001 Phoenix dactylifera PDK_20s1414244g001 I 0.000
gw1.325.30.1 Physcomitrella patens gw1.325.30.1 I 0.000
e_gw1.96.88.1 Physcomitrella patens e_gw1.96.88.1 I 0.000
POPTR_0002s18170 Populus trichocarpa POPTR_0002s18170 I 0.000
POPTR_0012s03530 Populus trichocarpa POPTR_0012s03530 I 0.000
POPTR_0004s07270 Populus trichocarpa POPTR_0004s07270 I 0.000
POPTR_0017s01380 Populus trichocarpa POPTR_0017s01380 I 0.000
POPTR_0015s05430 Populus trichocarpa POPTR_0015s05430 I 0.000
Pm025253 Prunus mume Pm025253 I 0.000
Pm028732 Prunus mume Pm028732 I 0.000
Pm028731 Prunus mume Pm028731 I 0.000
Pm012998 Prunus mume Pm012998 I 0.000
PRUPE_ppa006715mg Prunus persica PRUPE_ppa006715mg I 0.000
PRUPE_ppa005083mg Prunus persica PRUPE_ppa005083mg I 0.000
PRUPE_ppa004107mg Prunus persica PRUPE_ppa004107mg I 0.000
PRUPE_ppa001765mg Prunus persica PRUPE_ppa001765mg I 0.000
30171.m000418 Ricinus communis 30171.m000418 I 0.000
30076.m004464 Ricinus communis 30076.m004464 I 0.000
29677.m000183 Ricinus communis 29677.m000183 I 0.000
SapurV1A.0074s0170 Salix purpurea SapurV1A.0074s0170 I 0.000
SapurV1A.0147s0490 Salix purpurea SapurV1A.0147s0490 I 0.000
SapurV1A.0162s0390 Salix purpurea SapurV1A.0162s0390 I 0.000
SapurV1A.0202s0430 Salix purpurea SapurV1A.0202s0430 I 0.000
SapurV1A.0985s0170 Salix purpurea SapurV1A.0985s0170 I 0.000
SapurV1A.0003s0380 Salix purpurea SapurV1A.0003s0380 I 0.000
SELMODRAFT_78481 Selaginella moellendorffii SELMODRAFT_78481 I 0.000
SELMODRAFT_29451 Selaginella moellendorffii SELMODRAFT_29451 I 0.000
SELMODRAFT_19475 Selaginella moellendorffii SELMODRAFT_19475 I 0.000
Si006457m.g Setaria italica Si006457m.g I 0.000
Si010077m.g Setaria italica Si010077m.g I 0.000
Si014685m.g Setaria italica Si014685m.g I 0.000
Si017289m.g Setaria italica Si017289m.g I 0.000
Solyc02g036370.2 Solanum lycopersicum Solyc02g036370.2 I 0.000
Solyc10g005080.2 Solanum lycopersicum Solyc10g005080.2 I 0.000
Solyc03g098320.2 Solanum lycopersicum Solyc03g098320.2 I 0.000
PGSC0003DMG400025632 Solanum tuberosum PGSC0003DMG400025632 I 0.000
PGSC0003DMG400021459 Solanum tuberosum PGSC0003DMG400021459 I 0.000
PGSC0003DMG400011294 Solanum tuberosum PGSC0003DMG400011294 I 0.000
Sb04g031590 Sorghum bicolor Sb04g031590 I 0.000
Sb10g030960 Sorghum bicolor Sb10g030960 I 0.000
Sb06g026500 Sorghum bicolor Sb06g026500 I 0.000
Sb07g003870 Sorghum bicolor Sb07g003870 I 0.000
TCM_005021 Theobroma cacao TCM_005021 I 0.000
TCM_013400 Theobroma cacao TCM_013400 I 0.000
Traes_7DL_310E46F15 Triticum aestivum Traes_7DL_310E46F15 I 0.000
Traes_7AL_19F222799 Triticum aestivum Traes_7AL_19F222799 I 0.000
Traes_7DL_1D415A4CF Triticum aestivum Traes_7DL_1D415A4CF I 0.000
Traes_2DL_31EED5C94 Triticum aestivum Traes_2DL_31EED5C94 I 0.000
Traes_6BL_2F2381640 Triticum aestivum Traes_6BL_2F2381640 I 0.000
Traes_2AL_660616C44 Triticum aestivum Traes_2AL_660616C44 I 0.000
Traes_7BL_998EC9F74 Triticum aestivum Traes_7BL_998EC9F74 I 0.000
Traes_7AL_665B92F4E Triticum aestivum Traes_7AL_665B92F4E I 0.000
Traes_7BL_BA181D2AD Triticum aestivum Traes_7BL_BA181D2AD I 0.000
Traes_2BL_3041037F1 Triticum aestivum Traes_2BL_3041037F1 I 0.000
TRIUR3_13396 Triticum urartu TRIUR3_13396 I 0.000
TRIUR3_01040 Triticum urartu TRIUR3_01040 I 0.000
RVE1 Vitis vinifera VIT_04s0079g00410 I 0.000
VIT_15s0048g02410 Vitis vinifera VIT_15s0048g02410 I 0.000
gw1.8.161.1 Volvox carteri gw1.8.161.1 I 0.000
gw1.1.364.1 Volvox carteri gw1.1.364.1 I 0.000
GRMZM2G014902 Zea mays GRMZM2G014902 I 0.000
GRMZM2G029850 Zea mays GRMZM2G029850 I 0.000
GRMZM2G170322 Zea mays GRMZM2G170322 I 0.000
GRMZM2G175265 Zea mays GRMZM2G175265 I 0.000
GRMZM2G145041 Zea mays GRMZM2G145041 I 0.000