LPERR06G20000 (Leersia perrieri)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 LPERR06G20000 T254568_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FBP24_PETHY
M10997_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP24_01 		0.729 0.729
M17_MAIZE
M10959_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$M17_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR06G20000.1 MADS box 10 57

Links

Other MADS box family TFs
Other Leersia perrieri TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G32210 Brachypodium distachyon BRADI1G32210 I 0.771
Pavir.J10823 Panicum virgatum Pavir.J10823 I 0.750
OB06G31860 Oryza brachyantha OB06G31860 I 0.750
OPUNC06G21840 Oryza punctata OPUNC06G21840 I 0.750
GSMUA_Achr7G12610_001 Musa acuminata GSMUA_Achr7G12610_001 I 0.750
PK27158.1 Cannabis sativa PK27158.1 I 0.743
OLONG_011724 Oryza longistaminata OLONG_011724 I 0.729
ORUFI06G25880 Oryza rufipogon ORUFI06G25880 I 0.729
OS06G0667200 Oryza sativa OS06G0667200 I 0.729
ONIVA03G43670 Oryza nivara ONIVA03G43670 I 0.729
Sb10g026690 Sorghum bicolor Sb10g026690 I 0.729
ANR1 Vitis vinifera VIT_18s0001g07900 I 0.729
Solyc11g005120.1 Solanum lycopersicum Solyc11g005120.1 I 0.729
FBP24_PETHY Petunia x hybrida FBP24_PETHY D 0.729
Si007187m.g Setaria italica Si007187m.g I 0.729
29596.m000699 Ricinus communis 29596.m000699 I 0.729
Eucgr.F02161 Eucalyptus grandis Eucgr.F02161 I 0.729
BGIOSGA023435 Oryza indica BGIOSGA023435 I 0.729
F775_11207 Aegilops tauschii F775_11207 I 0.729
Thhalv10022995m.g Eutrema salsugineum Thhalv10022995m.g I 0.729
Thhalv10019132m.g Eutrema salsugineum Thhalv10019132m.g I 0.723
cassava39185.m1 Manihot esculenta cassava39185.m1 I 0.708
cassava4651.m1 Manihot esculenta cassava4651.m1 I 0.708
e_gw1.55.13.1 Physcomitrella patens e_gw1.55.13.1 I 0.708
Pavir.Ab00475 Panicum virgatum Pavir.Ab00475 I 0.708
SapurV1A.0004s0740 Salix purpurea SapurV1A.0004s0740 I 0.708
PK08595.1 Cannabis sativa PK08595.1 I 0.708
Pm004349 Prunus mume Pm004349 I 0.708
fgenesh1_pg.scaffold_118000119 Physcomitrella patens fgenesh1_pg.scaffold_118000119 I 0.708
cassava26340.m1 Manihot esculenta cassava26340.m1 I 0.708
Pavir.Aa03173 Panicum virgatum Pavir.Aa03173 I 0.708
VIT_03s0097g00160 Vitis vinifera VIT_03s0097g00160 I 0.708
Lus10028214.g Linum usitatissimum Lus10028214.g I 0.708
evm.TU.supercontig_125.55 Carica papaya evm.TU.supercontig_125.55 I 0.708
Gorai.010G032700 Gossypium raimondii Gorai.010G032700 I 0.708
evm.TU.supercontig_177.14 Carica papaya evm.TU.supercontig_177.14 I 0.708
Carubv10015972m.g Capsella rubella Carubv10015972m.g I 0.708
Cagra.3821s0004 Capsella grandiflora Cagra.3821s0004 I 0.708
Aquca_014_00077 Aquilegia coerulea Aquca_014_00077 I 0.708
Aquca_010_00060 Aquilegia coerulea Aquca_010_00060 I 0.708
MDP0000234911 Malus domestica MDP0000234911 I 0.708
Bostr.13083s0004 Boechera stricta Bostr.13083s0004 I 0.708
Lus10042918.g Linum usitatissimum Lus10042918.g I 0.708
Gorai.009G227500 Gossypium raimondii Gorai.009G227500 I 0.708
SELMODRAFT_450804 Selaginella moellendorffii SELMODRAFT_450804 I 0.708
LPERR02G04610 Leersia perrieri LPERR02G04610 I 0.708
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I 0.708
M17_MAIZE Zea mays M17_MAIZE D 0.708
MTR_5g031000 Medicago truncatula MTR_5g031000 I 0.708
OBART02G05380 Oryza barthii OBART02G05380 I 0.708
OB02G14670 Oryza brachyantha OB02G14670 I 0.708
GLYMA14G36221 Glycine max GLYMA14G36221 I 0.708
GLYMA09G33451 Glycine max GLYMA09G33451 I 0.708
ANR1 Arabidopsis thaliana AT2G14210 I 0.708
AMTR_s00127p00060060 Amborella trichopoda AMTR_s00127p00060060 I 0.708
BGIOSGA007056 Oryza indica BGIOSGA007056 I 0.708
GLYMA01G02525 Glycine max GLYMA01G02525 I 0.708
GLYMA02G38091 Glycine max GLYMA02G38091 I 0.708
TCM_034549 Theobroma cacao TCM_034549 I 0.708
OGLUM02G05240 Oryza glumaepatula OGLUM02G05240 I 0.708
AMTR_s00001p00270400 Amborella trichopoda AMTR_s00001p00270400 I 0.708
Sb04g004736 Sorghum bicolor Sb04g004736 I 0.708
SELMODRAFT_450837 Selaginella moellendorffii SELMODRAFT_450837 I 0.708
Si018183m.g Setaria italica Si018183m.g I 0.708
Solyc12g088080.1 Solanum lycopersicum Solyc12g088080.1 I 0.708
OMERI02G06250 Oryza meridionalis OMERI02G06250 I 0.708
POPTR_0005s19440 Populus trichocarpa POPTR_0005s19440 I 0.708
ONIVA02G05710 Oryza nivara ONIVA02G05710 I 0.708
ORGLA02G0049700 Oryza glaberrima ORGLA02G0049700 I 0.708
POPTR_0001s29100 Populus trichocarpa POPTR_0001s29100 I 0.708
ORUFI02G05500 Oryza rufipogon ORUFI02G05500 I 0.708
MADS29 Oryza sativa OS02G0170300 I 0.708
OPUNC02G04560 Oryza punctata OPUNC02G04560 I 0.708
Bra003919 Brassica rapa Bra003919 I 0.702
Bo6g094120 Brassica oleracea Bo6g094120 I 0.702