MTR_1g054265 (Medicago truncatula)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 MTR_1g054265 T254704_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL91
M10922_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G66656_01 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH41725 MADS box 10 57

Links

Other MADS box family TFs
Other Medicago truncatula TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
hlh-1 Caenorhabditis elegans WBGene00001948 D 0.000
WUBG_05117 Wuchereria bancrofti WUBG_05117 I 0.000
BXY_0489100 Bursaphelenchus xylophilus BXY_0489100 I 0.000
DICVIV_08170 Dictyocaulus viviparus DICVIV_08170 I 0.000
EEL_0000993601 Elaeophora elaphi EEL_0000993601 I 0.000
EVEC_0000720901 Enterobius vermicularis EVEC_0000720901 I 0.000
HCOI02168200 Haemonchus contortus HCOI02168200 I 0.000
nAv.1.0.1.g02052 Acanthocheilonema viteae nAv.1.0.1.g02052 I 0.000
nDi.2.2.2.g00288 Dirofilaria immitis nDi.2.2.2.g00288 I 0.000
NECAME_14163 Necator americanus NECAME_14163 I 0.000
nLs.2.1.2.g06915 Litomosoides sigmodontis nLs.2.1.2.g06915 I 0.000
nOo.2.0.1.g00910 Onchocerca ochengi nOo.2.0.1.g00910 I 0.000
OFLC_0000064301 Onchocerca flexuosa OFLC_0000064301 I 0.000
scaffold6-EXSNAP2012.144 Pristionchus exspectatus scaffold6-EXSNAP2012.144 I 0.000
SMUV_0000995901 Syphacia muris SMUV_0000995901 I 0.000
TCLT_0000019401 Thelazia callipaeda TCLT_0000019401 I 0.000
TELCIR_07640 Teladorsagia circumcincta TELCIR_07640 I 0.000
ASU_01867 Ascaris suum ASU_01867 I 0.000
ASIM_0001156501 Anisakis simplex ASIM_0001156501 I 0.000
ANCCEY_00328 Ancylostoma ceylanicum ANCCEY_00328 I 0.000
Bm1750 Brugia malayi Bm1750 I 0.000
CapteG36721 Capitella teleta CapteG36721 I 0.000
CBN11281 Caenorhabditis brenneri CBN11281 I 0.000
CGI_10007380 Crassostrea gigas CGI_10007380 I 0.000
CJA13327 Caenorhabditis japonica CJA13327 I 0.000
CRE17301 Caenorhabditis remanei CRE17301 I 0.000
LOAG_16988 Loa loa LOAG_16988 I 0.000
Ppa-hlh-1 Pristionchus pacificus PPA08246 I 0.000
TC015855 Tribolium castaneum TC015855 I 0.000
WBGene00247572 Onchocerca volvulus WBGene00247572 I 0.000
YQE_11476 Dendroctonus ponderosae YQE_11476 I 0.000
Ocbimv22002759m.g Octopus bimaculoides Ocbimv22002759m.g I 0.000
LDEC009949 Leptinotarsa decemlineata LDEC009949 I 0.000
ACOC_0000253201 Angiostrongylus costaricensis ACOC_0000253201 I 0.000
ALUE_0000745301 Ascaris lumbricoides ALUE_0000745301 I 0.000
TELCIR_14945 Teladorsagia circumcincta TELCIR_14945 I 0.000