TF Information

MTR_5g066180 *(Medicago truncatula)* MADS box
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00319 (SRF-TF)	IPR002100	MTR_5g066180	T254805_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
SVP M06984_2.00	Arabidopsis thaliana	DDCCVAAWANGGHAA	TTDCCNTWTTBGGHH	Dap-seq OMalley et al.(2016) SVP_colamp_v3b	0.833	0.833
SVP M06985_2.00	Arabidopsis thaliana	CCMAAWANGGWAANW	WNTTWCCNTWTTKGG	Dap-seq OMalley et al.(2016) SVP_col_v3b	0.833	0.833
SVP M08424_2.00	Arabidopsis thaliana	NWWHCCMAAAADGGAAARHH	DDYTTTCCHTTTTKGGDWWN	ChIP-chip Mathelier et al.(2014) MA0555.1	0.833	0.833
Q9FVN1_MAIZE M10982_2.00	Zea mays	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS2_03	0.833	0.833
Q9ATE8_PETHY M11011_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP21_01	0.771	0.771
Q40591_TOBAC M11002_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS1_03	0.771	0.771
Q9ATE3_PETHY M11008_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP28_01	0.750	0.750
AGL1 M02694_2.00	Arabidopsis thaliana	NDTDCCWWWWNDGGWAHN	NDTWCCHNWWWWGGHAHN	SELEX Mathelier et al.(2014) MA0585.1	0.729	0.729
SOC1 M08425_2.00	Arabidopsis thaliana	CCAAAAAWRGAAAND	HNTTTCYWTTTTTGG	ChIP-chip Mathelier et al.(2014) MA0554.1	0.729	0.729
AGL1 M10920_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AGL1_01	0.729	0.729
AGL1 M10921_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AGL1_02	0.729	0.729
SOC1 M10915_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AGL20_01	0.729	0.729
Q9ATE9_PETHY M11012_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP20_01	0.729	0.729
MADS2 M10966_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS2_02	0.729	0.729
SHP2 M10914_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$SHP2_01	0.729	0.729
A1YJE4_HORVD M10900_2.00	Hordeum vulgare	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BM10_01	0.708	0.708
Q9ATE7_PETHY M11010_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$FBP22_01	0.708	0.708
O82698_MALDO M11021_2.00	Malus domestica	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS10_01	0.708	0.708
O82699_MALDO M11022_2.00	Malus domestica	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS11_01	0.708	0.708
MAD14_ORYSJ M10960_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS14_01	0.708	0.708
MAD55_ORYSJ M10962_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MADS55_01	0.708	0.708
Q84LI3_WHEAT M10979_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TAVRT1_01	0.708	0.708
Q4U0F1_WHEAT M10978_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TAVRT2_01	0.708	0.708
O82128_WHEAT M10965_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WAP1_01	0.708	0.708
For this family, TFs with SR scores > 0.700* will likely have a similar motif*