MTR_8g051580 (Medicago truncatula)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 MTR_8g051580 T254830_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL91
M10922_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G66656_01
0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AET02747 MADS box 10 57

Links

Other MADS box family TFs
Other Medicago truncatula TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_05023 Cicer arietinum Ca_05023 I 0.875
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.854
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.854
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.854
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.854
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.854
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.833
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.833
Ca_24185 Cicer arietinum Ca_24185 I 0.833
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.833
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.812
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.812
MTR_8g046350 Medicago truncatula MTR_8g046350 N 0.812
GLYMA08G03793 Glycine max GLYMA08G03793 N 0.812
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.812
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.812
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.792
chr3.CM0059.60.nd Lotus japonicus chr3.CM0059.60.nd N 0.792
TCM_029518 Theobroma cacao TCM_029518 I 0.792
MDP0000274606 Malus domestica MDP0000274606 N 0.792
29693.m002039 Ricinus communis 29693.m002039 I 0.792
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.771
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.771
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.771
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.771
MDP0000120467 Malus domestica MDP0000120467 N 0.771
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.771
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.771
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.771
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.771
GLYMA08G03820 Glycine max GLYMA08G03820 I 0.771
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.771
Pm030655 Prunus mume Pm030655 I 0.771
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.750
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.750
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.750
AGL91 Arabidopsis thaliana AT3G66656 D 0.750
Bo4g182590 Brassica oleracea Bo4g182590 I 0.750
Bra021910 Brassica rapa Bra021910 I 0.750
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.750
Cla019897 Citrullus lanatus Cla019897 N 0.750
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.750
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.750
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.750
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.729
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.729
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.729
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.729
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.729
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.729
Lus10040832.g Linum usitatissimum Lus10040832.g N 0.729
AGL29 Arabidopsis thaliana AT2G34440 I 0.729
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.729
Cucsa.212320 Cucumis sativus Cucsa.212320 N 0.729
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.708
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708